Brachybacterium ginsengisoli: CFK41_08070
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Entry
CFK41_08070 CDS
T05099
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bgg
Brachybacterium ginsengisoli
Pathway
bgg03030
DNA replication
bgg03430
Mismatch repair
bgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFK41_08070 (holA)
03430 Mismatch repair
CFK41_08070 (holA)
03440 Homologous recombination
CFK41_08070 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgg03032
]
CFK41_08070 (holA)
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_08070 (holA)
Enzymes [BR:
bgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFK41_08070 (holA)
DNA replication proteins [BR:
bgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFK41_08070 (holA)
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFK41_08070 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ATG54726
UniProt:
A0A291GX60
LinkDB
All DBs
Position
1825254..1826240
Genome browser
AA seq
328 aa
AA seq
DB search
MSDVEWHSVALAPIVLIHGTETLIADRAVQRLRGLAREADPTVEIHDLSGDAAGPGALAQ
VASPSLFGEPRFVVVPELQSAPDALVIELLDYLRSPEQDVTLVLVHRGGNRGKKLLDALK
KADVPRVDASPVKRASDKQTFVAAEFARAQRRIQPEALIALVDAFGTDLAELAAISSQLI
EDTTPDPGEQPAQVTVAEVHALTAGRVESTAFAVADAAIAGREQDALQLLQQAQLAGADP
VPIVAAIASKMRSLAKVSAPGATPRSLGMPDWMLRNLSREARHWNDRSLARAIEAVARAD
HEVKGAGRDPQWSVQRMVMGICRARRAQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgtcgagtggcacagcgtcgccctcgcaccgatcgtcctgatccacggcacc
gagaccctgatcgccgatcgcgccgtccagcgactgcgcggcctcgcccgcgaggcggat
cccacggtggagatccatgacctctccggggacgccgccggccccggcgctctcgcccag
gtggcgagcccgtcgctgttcggcgagccccgcttcgtggtggtccccgagctgcagtcc
gcgcccgatgccctggtgatcgagctgctggactatctgcggtccccggagcaggacgtc
accctggtgctcgtgcaccgcggcggcaaccggggcaagaagctcctggacgccctcaag
aaggccgatgtcccgcgcgtcgatgcgagccccgtcaagcgcgcctccgacaagcagacc
ttcgtggccgccgagttcgcccgagcccagcgccgcatccagccggaggcgctgatcgcc
ctggtcgacgccttcggcaccgatctcgcggagctcgccgcgatcagcagccagctcatc
gaggacaccacccccgatcccggcgagcaacctgcccaggtcaccgtcgccgaggtccac
gccctcaccgcggggcgcgtggagtcgaccgccttcgccgtggcggacgccgccatcgcc
gggcgtgagcaggatgcgctgcagctgctccagcaggcgcagctcgccggagccgatccg
gtcccgatcgtcgccgcgatcgcctccaagatgcggtccctggcgaaggtctccgcgccc
ggtgccacccctcgcagcctcggcatgcccgactggatgctccgcaacctcagccgcgag
gcccgccactggaacgatcgttccctcgccagggcgatcgaggcggtcgcacgcgccgat
cacgaggtcaagggtgcgggccgcgacccgcagtggtccgtgcagcgcatggtcatgggc
atctgccgcgcacgtcgcgcacagtga
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