Brachybacterium ginsengisoli: CFK41_09720
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Entry
CFK41_09720 CDS
T05099
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bgg
Brachybacterium ginsengisoli
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgg03032
]
CFK41_09720
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_09720
Enzymes [BR:
bgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFK41_09720
DNA replication proteins [BR:
bgg03032
]
Prokaryotic type
DNA Topoisomerases
CFK41_09720
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFK41_09720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ATG55014
UniProt:
A0A291GY40
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Position
2181913..2184381
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AA seq
822 aa
AA seq
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MMSLMARSRSTTPPSGDEAVEETIVDIDVTSEMESSFLEYAYSVIYSRALPDARDGLKPV
QRRILYMMAEMGLRPEKGHVKSQRVVGEVMGKLHPHGDTAIYDALVRMAQSFNMRLPLVD
GHGNFGSLDNGPAAPRYTEARLAKAALLMTDSLDEDVVDMIPNYDNQLLQPEVLPAQYPN
LLVNGASGIAVGMATNMAPHNLVETIAAARHLIAHPEAELEELMRFVPGPDLPTGGRIVG
LEGIRDAYRTGRGSFKMRATTRIENVTSRRKGIVVTELPYQVGPERLAEKLRDAVQAKRV
QGVTDYQDLTDRHHGLRLVLTVKSGFDPEAVLQQLYKYTPLEESFGINNVALVDGQPRTL
GLKQMLEVFVDHRLKVVRRRTEHRLSRRKARLHLVEGLLLAILDIDEVIQIVRQSDDAET
ARTRLMTVFDLSELQAEYILELRLRRLTKFSQIDLEAERDDLRREIDRLEEILGSESVLR
ALVSDELATVAAEHGDSRRTVLLEASEKPAVTAGASLEVADEPCGVLLTGTGLIARVAGE
EPLQREGQRSSHDVIVSAVRSSTRSMIGVVTDQGRVLRLSVVDLPSLAPTAGAPSLAGGT
RITDLLDLEREERALGLIRVAEADLERGGAIALGTRQGVVKRVQLDFPRADGFEIISLKD
GDAVVGVVDLEEDEDLDLVFVTSDAQLLHFPSSGVRPQGRGAGGVAGIKLADGASVLSFG
VVDVTAPADVVTVAGSSATLPLLQTGSLKVTSLTEFPAKGRATAGMRCHRFLRGEDSLIG
AWVVPHPARASSEAGQPIDLPEPTGRRDGSGTPVAVPIAAVG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcccttatggcccgatcacgcagcaccaccccgccctccggcgacgaggccgtc
gaggagaccatcgtcgacatcgacgtcaccagtgagatggagtcgtcgttcctggagtac
gcgtactccgtgatctactcccgggcgctcccggacgcccgcgacgggctcaagcccgtc
cagcggcgcatcctctacatgatggccgagatgggtctgcgtcccgagaagggccacgtg
aagagccagcgtgtggtcggcgaggtgatgggcaagctccacccccacggcgacaccgcg
atctatgacgccctggtgcgcatggcgcagagcttcaacatgcgcctgccgctggtggac
gggcacggcaacttcggctcgctggacaacggcccggcggcgccccgatacaccgaggcg
cgcctggccaaggccgccctgctcatgacggactcgctggacgaggacgtcgtggacatg
atcccgaactacgacaaccagctcctgcagccggaggtgctcccggcgcagtacccgaac
ctcctggtcaacggagcctcggggatcgctgtgggcatggcgacgaacatggcgccccac
aacctggtcgagacgatcgccgccgcccggcatctgatcgcccacccggaggccgagctc
gaggagctgatgcgcttcgtgcccggcccggacctgcccaccggtggccggatcgtgggc
ctcgagggcatccgcgacgcctaccgcaccggtcgcggctccttcaagatgcgggccacc
acccgcatcgagaacgtcacctcgcgccgcaagggcatcgtcgtcaccgagctgccgtac
caggtgggtccggagcgcctcgcagagaagctgcgcgatgccgtgcaggccaagcgggtc
cagggcgtcaccgactaccaggacctcaccgatcgccaccacggcctgcgcctggtgctg
acggtcaagtccggcttcgacccggaggccgtgctccagcagctgtacaagtacacgccg
ctcgaggagtccttcggcatcaacaacgtggccctggtcgacggccagccgcgcaccctg
ggcctgaagcagatgctcgaggtcttcgtcgaccaccgcctgaaggtggtgcgccgccgc
accgagcaccgcctcagccgtcgcaaggcccgcctgcacctggtggagggcctcctgctg
gcgatcctggacatcgacgaggtcatccagatcgtgcgccagagcgatgacgccgagacc
gcccgcacccgcctgatgaccgtcttcgacctctccgagctccaggccgagtacatcctc
gagctgcgcctgcgccgcctgacgaagttctcgcagatcgacctcgaggccgagcgcgac
gatctgcgccgcgagatcgatcgcctcgaggagatcctgggctccgagagcgtcctgcgc
gccctggtctccgacgagctggccacggtggccgccgagcacggcgactcgcgccgcacg
gtgctcctggaggcctcggagaagcctgccgtgaccgccggggcgtccctcgaggtcgcc
gacgagccctgcggcgtgctgctcacgggcaccgggctgatcgcccgcgtcgccggcgag
gagccgctgcagcgcgaggggcagcgcagctcgcacgacgtcatcgtctcggccgtccgc
tccagcacccggtcgatgatcggtgtcgtcaccgatcagggccgggtgctgcggctgtcc
gtcgtggatctgccctcgctcgccccgacggccggcgccccgtcgctcgccggcggcacc
cggatcaccgacctcctcgacctcgagcgggaggagcgggcgctgggcctgatccgcgtc
gccgaggcggatctcgagcggggcggggccatcgcgctggggacccggcagggcgtggtc
aagcgcgtccagctggacttcccgcgcgccgacggcttcgagatcatctccctcaaggac
ggagacgcggtggtgggcgtcgtcgatctcgaggaggacgaggacctcgacctggtcttc
gtcacctcggacgctcagctgctccacttcccctcctcgggtgtgcgcccgcagggccgt
ggagccggaggcgtcgcgggcatcaagctcgccgacggcgcctcggtcctctccttcggg
gtggtcgacgtgacggcgccggccgacgtggtcaccgtcgcgggaagctccgcgaccctc
ccgctgctgcagacgggctcgctgaaggtcacctccctcaccgagttccccgcgaagggc
cgtgcgaccgccgggatgcgctgccatcggttcctgcgcggcgaggactcgctgatcggc
gcctgggtggtgccccatccggcgcgcgcctcctccgaggcgggtcagccgatcgatctg
cccgagcccaccgggcgccgcgacggctcgggcacgccggtggccgtgccgatcgccgcc
gtcggctga
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