Brachybacterium ginsengisoli: CFK41_09830
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Entry
CFK41_09830 CDS
T05099
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bgg
Brachybacterium ginsengisoli
Pathway
bgg03030
DNA replication
bgg03430
Mismatch repair
bgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFK41_09830
03430 Mismatch repair
CFK41_09830
03440 Homologous recombination
CFK41_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgg03032
]
CFK41_09830
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_09830
Enzymes [BR:
bgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFK41_09830
DNA replication proteins [BR:
bgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFK41_09830
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFK41_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATG55034
UniProt:
A0A291GY64
LinkDB
All DBs
Position
2208010..2209668
Genome browser
AA seq
552 aa
AA seq
DB search
MSARRQLSFDDRGTPLAEATLVVVDLETTGTDPRSDAITEIGAVKVRGGEVLGEFRTFVD
PQRPIPAYIASLTGITDASVAGAPSIGTVLPMFLDFVGDAALVAHNARFDIGFLSAQAAA
CEITWPKPQVLDTLALARTVFRRDEVRDHKLSTLARHVGAGITPDHRALSDARATVDVLH
AIIERLGAAGASTLEDLGTAHRRATTAQLRKKHLAADVPPVPGVYQFLDQHGAVLYVGTS
RNLRTRVRTYFTAAETRRKVLDMLPRAESIRVIECATPTEAGIRELRIIAREKPPSNRHG
LHPEKAHWLRLGPGGQGLRAARLARPEDDGSAQIGPLTSRHDVEPLRGLLTDAILGRGTA
LGGGAEPDLGSGGHRDRIRRAMLEDPTEVLDHAAARLRAHVDAGRYEDAERLRRLVHGYL
TAARRASRLRALAAVPLLVAARPSTEAVIGGRGWELLALRHGRFSGTTLVPSGKDPLPFA
RSLEMTGTGEAELAAPMCQGYHQEAEILLAWLEGEGVRTVLVEGAWQVPARARFDQEHLA
RRFSRTARGPEA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacgccgccagctgagcttcgacgatcgcggcaccccgctcgcggaggcgacg
ctcgtggtcgtggacctcgagaccaccgggacggatccccgcagcgatgcgatcaccgag
atcggagccgtcaaggtccgcggcggcgaggtgctcggggagttccgcaccttcgtggat
ccccagcgccccatcccggcctacatcgcctcactcaccggcatcaccgacgcctcggtg
gccggggcgccctcgatcggcacggtgctgccgatgttcctggacttcgtcggggatgcg
gccctggtggcgcacaacgcccgcttcgacatcggcttcctcagcgcgcaggcggcggcg
tgcgagatcacctggcccaagccccaggtgctggacaccctcgccctggcgcgcaccgtc
ttccgacgggacgaggtccgcgaccacaagctctccaccctggcccggcacgtgggggcc
ggcatcaccccggaccaccgggcgctctccgacgcccgcgcgaccgtcgacgtgctgcac
gcgatcatcgagcggctcggagcggccggagcctcgaccctcgaggatctcggcacggcg
caccgccgggccaccaccgctcagctgcgcaagaagcacctcgccgccgacgtcccgccg
gtacccggcgtgtaccagttcctcgaccagcacggcgcggtgctgtacgtggggacctcc
cgcaacctccgcacccgggtgcgcacctacttcacggccgccgagacccgccgcaaggtg
ctggacatgctccctcgtgcggagtcgatccgcgtcatcgagtgcgccacccccaccgag
gccgggatccgcgagctgcggatcatcgcccgcgagaagcctccctcgaaccgccacggc
ctccacccggagaaggcgcactggctgcgactgggacctggcggacagggtctgcgcgcc
gcgcggctcgcgaggccggaggacgacggctccgcccagatcgggccgctgacctcgcgg
cacgacgtcgagccgctgcgcggtctgctgaccgatgcgatcctcggccgcggcacggcg
ctcgggggcggggcggagcccgatctcggctccggcggacaccgggaccggatccgccgc
gcgatgctcgaggacccgaccgaggtcctggaccacgcggccgcgcgcctgcgcgcccac
gtcgacgccggacgctacgaggacgccgagaggctgcgccgcctcgtgcacggctatctc
acggcggcgcggcgcgcctcacgactgcgagccctcgccgccgtgcctctgctcgtggcg
gcccgtcccagcaccgaggcggtgatcggcgggcgcgggtgggagctgctcgctctccgc
cacggccgcttctccggcacgaccctcgtcccctccggcaaggaccccctgcccttcgcg
cgatccctcgagatgaccgggaccggggaggccgagctcgcggccccgatgtgccagggc
taccaccaggaggcggagatcctgctggcctggctcgagggcgagggagtgcgcaccgtg
ctggtcgagggtgcctggcaggtccccgcccgtgcccgcttcgaccaggagcatctcgcc
cggcgcttctcccggaccgccaggggccccgaggcatag
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