Brachybacterium ginsengisoli: CFK41_09960
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Entry
CFK41_09960 CDS
T05099
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bgg
Brachybacterium ginsengisoli
Pathway
bgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFK41_09960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_09960
Enzymes [BR:
bgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK41_09960
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFK41_09960
RecFOR pathway proteins
CFK41_09960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
nSTAND3
AAA_22
AAA_14
Mg_chelatase
DUF815
RNA_helicase
ResIII
AAA_3
NTPase_1
ABC_tran
AAA_18
TsaE
Zeta_toxin
IstB_IS21
Sigma54_activ_2
AAA_33
NACHT
NPHP3_N
AAA_19
AAA_25
bpMoxR
AAA_17
AAA_28
Rad17
NB-ARC
AAA_11
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ATG55053
UniProt:
A0A291GXZ5
LinkDB
All DBs
Position
complement(2238954..2239994)
Genome browser
AA seq
346 aa
AA seq
DB search
MTEPESLTSPEAVPPERTAEAALRPRRLDEFVGQQVVRDQLSLVLDAASARGRTPEHVLL
SGPPGLGKTTLAMIIAAELNAPLRITSGPAIQHAGDLAAILSSLDEGEVLFIDEIHRLAR
PAEEMLYIAMEDFRVDVVVGKGVGATSIPLDLPPFTVVGATTRAGLLPAPLRDRFGFIGH
LDFYDAAELREVVQRSAQRLDVDLDESAAVEISTRSRGTPRIANRLLRRVRDWAQVRGSG
ALDLAAAKEALRVYEVDDRGLDRLDRAVLSALCGRFSGGPVGLSTLAVAVGEEIETVETM
VEPYLVREGFLLRTPRGRAAAPAAWTHLGLAPPEGPEGVAPMLGRF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccgaatcgctgaccagtcccgaggccgtgccgccggagcggacggccgag
gcggcgctgcgcccgcgtcggctggacgagttcgtgggccagcaggtcgtgcgcgaccag
ctctcgctggtgctggatgccgcttccgcacgcggccgcaccccggagcacgtgctcctc
tcgggtccgcccggcctcggcaagaccaccctcgccatgatcatcgccgccgagctgaac
gctccgctgcgcatcacctccgggccggcgatccagcacgcgggcgatctggccgcgatc
ctctcctcgctcgacgagggggaggtcctgttcatcgacgagatccatcgcctggcgcga
cccgccgaggagatgctctacatcgcgatggaggacttccgcgtcgatgtggtggtcggc
aagggcgtgggggcgacgtccatcccgctggacctgccgcccttcaccgtcgtcggcgcg
accacccgggcgggcctgctccccgctccgctccgggaccgcttcggcttcatcggccac
ctcgacttctacgacgccgccgagctgagggaggtcgtccagcgctccgcgcagcggctc
gacgtcgacctggacgagtccgcggcggtcgagatctccacgcgctcgcgcggcacgccg
cgcatcgccaaccgcctgctgcgacgggtccgggactgggcgcaggtgcgcggcagcggg
gcgctcgatctggccgcggcgaaggaggccctgcgcgtctacgaggtcgacgatcgcgga
ctggaccggctggatcgggccgtgctctccgctctgtgcgggcgcttctccgggggaccg
gtgggcctgtccaccctggccgtcgccgtgggggaggagatcgagacggtcgagacgatg
gtcgagccctacctggtgcgagagggcttcctgctccgcaccccgcggggacgggcggca
gcgccggcggcttggacgcacctggggctggctccgccggagggccccgagggggtcgcg
cccatgctcggccgcttctga
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