Brachybacterium ginsengisoli: CFK41_12180
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Entry
CFK41_12180 CDS
T05099
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bgg
Brachybacterium ginsengisoli
Pathway
bgg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK41_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgg03000
]
CFK41_12180
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_12180
Enzymes [BR:
bgg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CFK41_12180
Transcription factors [BR:
bgg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CFK41_12180
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFK41_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HTH_29
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ATG55438
UniProt:
A0A291GZ08
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All DBs
Position
2731128..2732663
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AA seq
511 aa
AA seq
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MDTMTDDERFAAIRARDTRFDGMFFTCVRSTGIFCRPSCPARTPHRAGVEFVPSAAAAVA
AGYRACKRCGPTAPPGSPDADPAGSLAGRALRLIDAGALDEDGTVPELARRLAVSERTLH
RALVGATGAGALAHARIRRARRAHELVVGSVLPLATIAHASGFGSERQFHDTFSRLFGHA
PSVVRERSAAGGARADDGAVVLTAQLAVRHPFDGAGLAAWFAHRAVPGVEEVEGLRWTRA
VHLPHGPGVLEVDLGAPDPRPLPLTLRLSDLRDHAAAISLTRRLLDLDADPVGIDEGLGR
ALPALGPLLVARPGVRLPGTSTLAEALLWAITGQQISTVQARTMLTRATDLLTTPLPPAL
RTGTVDRLPVDPARAADRVEDWFRGPRARARTLHDAVGEIAGAGLDAAPDIDELRGRLLA
LRGVGPWTADYVLLRGARAIDVAPARDVALLAAARDLGLAEDHDELQQALATASPWRSYA
ALHLWQHQAQLRRSSPTSASPARPVPEGQNP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatgaccgatgatgagcgcttcgccgcgatccgcgcgagggacacccgtttc
gacggcatgttcttcacctgcgtgcgctccaccgggatcttctgccgcccctcctgcccc
gcgcggaccccgcaccgggccggggtcgagttcgtcccgtcggccgcggcggcggtcgcc
gccgggtaccgggcgtgcaaacgctgtgggccgacggccccgcccggcagccccgacgcg
gatccggccggatcgctcgcgggccgcgcgctgcggctcatcgatgccggcgcgctggac
gaggacggcaccgttccggagctcgcgcgccgtctcgccgtctccgagcgcaccctccac
cgagccctggtgggggcgaccggtgccggagcgctcgcccatgcgcggatccgtcgggcc
cgtcgggcgcatgagctcgtggtgggctccgtgctgccgctggcgaccatcgcccacgcc
tcgggcttcggcagcgagcgccagttccacgacaccttctcccgcctgttcgggcacgct
ccctcggtggtgcgagagcgctccgccgccggaggggctcgggccgacgacggggccgtc
gtgctcaccgcccagctggcggtgcgccatcccttcgacggggccgggctcgccgcctgg
ttcgcccaccgcgcggtgccgggtgtggaggaggtcgagggactgcgatggacccgcgcc
gtgcacctcccccacgggcccggggtgctcgaggtcgatctcggcgccccggatccgcgc
ccgttgcccctcaccctccgactctcggacctccgggaccacgccgcagcgatctcgctg
acccgtcggctgctggatctcgacgccgatcccgtcgggatcgacgaagggctcggccgg
gcgctgccggcgctcggcccgctgctcgtggctcggcccggggtgcgcctgcccggcacc
tcgaccctcgccgaggctctgctgtgggcgatcaccgggcagcagatctcgaccgtccag
gcccgcacgatgctcacccgcgccaccgacctgctcaccactcccctgccgccggcgctg
cgcaccggcaccgtggaccgcctgccggtcgatccggcgagagccgccgaccgcgtggag
gactggttccgcgggccccgcgcccgggcccggaccctgcacgatgcggtcggcgagatc
gcgggcgcgggcctcgacgcggcgccggacatcgacgagctgcggggccggctgctggcg
ctgcgcggcgtgggcccctggacggccgactacgtcctgctgcgcggagcacgggcgatc
gacgtggctcccgcccgcgacgtcgcgctgctcgccgcggcccgcgacctggggctcgcc
gaggaccacgacgagctgcagcaggccctggcgaccgcctcgccctggcgctcctacgcc
gccctgcatctgtggcagcaccaggcgcagctgcgccgctcctcgccgacctccgcatcc
cctgcacgacccgtcccggaaggacagaatccatga
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