Brachybacterium ginsengisoli: CFK41_12395
Help
Entry
CFK41_12395 CDS
T05099
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgg
Brachybacterium ginsengisoli
Pathway
bgg03420
Nucleotide excision repair
bgg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK41_12395
03430 Mismatch repair
CFK41_12395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgg03400
]
CFK41_12395
Enzymes [BR:
bgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK41_12395
DNA repair and recombination proteins [BR:
bgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK41_12395
MMR (mismatch excision repair)
Other MMR factors
CFK41_12395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATG55480
UniProt:
A0A291GZ54
LinkDB
All DBs
Position
complement(2774921..2777770)
Genome browser
AA seq
949 aa
AA seq
DB search
MSSLFDDLSLPDAFRRLDGVSVAPQTRDGDPVAPQGGSEPDEEAPLAQEPPAPEEPPYDE
EPPYDDAPPPEDELLPPPAADHRPQRSADRPGPGGPVPGGPVPGFVAAGLTELTDGLNPA
QREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLRSGEASPGEILAITFTNKAAAEMRER
VGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLITTIAKDLELD
TKKHAPRALASRISTLKNDLVDPIDFADQAESAKNPFERTLARIYTNYTERLRQANAVDF
DDLIGLTVTLLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGDDPRADLTVVG
DSDQSIYAFRGATIRNIVEFEQDFPSARTIVLEQNYRSSQNILTAANSVIEENAGRRKKN
LWTDQGEGEQITLYVADDEREEARYIGRQIDALVDDGRGAGDIAIFYRANAQSRALEDQL
IRVGLPYRVVGGTRFYERREIKDAIAYLQVLTNPADEINLRRILNVPKRGIGDRAEAVIA
MLAERERIGFGEALRRAEEAPGIATRSLNAVRTFVAMLDDLRALAEDGSGPADLIEAILQ
RSGYYAELQDSDDPQDESRLENLAELVSVAAEFEAQVEEADAVASEYEDAESAESAESGE
SAESGEAESSEPGSAEQGSAGARGTAPQEVGTAPDAELTAPDDPEASLVDRFLEKVSLVA
DADQIPGEEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPDELEEERRLAYV
GITRAREKLYLTRAQMRSLWGQTQYMPASRFLDEVPESVLDVARAGSTLGGAGFGGGYSG
GSGGYGGSGGRGGSGGHSSGGGRGPSFSGGIGGGRSDIKRPSLGSGRKATPADQLPQLAV
GDRITHDSFGMGTVTEVAGQGEKTQIEVQFKAPHGTKRLVLRYAAITKL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctcttcgacgacctttcgctgcccgacgccttccgccgcctcgacggggtg
tcggtggcgccgcagacccgcgacggcgatcctgtcgcgccgcagggagggtcggaaccc
gatgaggaggccccgctcgcgcaggagccgccggcccccgaggagcccccgtacgacgag
gagcccccgtacgacgacgcgccgccgcccgaggacgagcttctgcccccgcccgccgcg
gaccaccgcccgcagcgctcggcggaccggcccggccccggcggtccggtgccgggcggt
ccggtgcccggattcgtcgccgccgggctcaccgagctcaccgatggcctgaacccggcg
cagcgggaggccgtcgagcatcgcggatccccgctgctcatcgtcgccggcgccggatcg
ggcaagacccgcgtgctcacccggcgcatcgcccatctgctgcgctcgggcgaggcctcg
cccggcgagatcctcgcgatcaccttcacgaacaaggccgccgccgagatgcgcgaacgc
gtgggcgagctggtgggtccggtcgcccgcagcatgtgggtctccaccttccacagcgcc
tgcgtgcggatcctgcgccgggacgcggccgccgccgggctgaagagctccttcaccatc
tatgacagcgccgattccctgcggctgatcacgacgatcgccaaggacctcgagctggac
acgaagaagcatgctccgcgcgccctggcctcacggatctccacgctgaagaacgacctc
gtggacccgatcgacttcgccgaccaggcggagagcgcgaagaaccccttcgagcgcacc
ctcgcccggatctacacgaactacaccgagcggctgcgtcaggccaacgcggtggacttc
gacgacctcatcggtctgacggtgacgctgctgcgggagaacccggcgatccgcgagggc
taccgccgccgcttccgccacctgctggtggacgagtaccaggacaccaacaccgcccag
taccagctggtgcgggagctggtgggggacgacccgcgcgccgatctcaccgtggtgggc
gactcggaccagtcgatctacgccttccgcggcgcgaccatccgcaacatcgtcgagttc
gagcaggacttcccctcggcccgcacgatcgtgctcgagcagaactaccgctcctcccag
aacatcctcaccgccgcgaactccgtgatcgaggagaacgccgggcggcgcaagaagaac
ctgtggaccgatcagggcgagggcgagcagatcaccctctacgtcgccgatgacgagcgc
gaggaggcccggtacatcgggcggcagatcgatgccctcgtggacgacggccgcggtgcc
ggtgacatcgcgatcttctaccgggccaacgcccagtcccgggcgctcgaggaccagctg
atccgtgtgggcctgccgtaccgcgtggtcggcgggacccgcttctacgagcgccgcgag
atcaaggacgcgatcgcctatctccaggtgctgaccaacccggccgacgagatcaacctg
cgccgcatcctcaacgtccccaagcggggcatcggcgatcgggccgaggccgtcatcgcg
atgctcgccgagcgggagcggatcggcttcggcgaggccctgcgccgcgccgaggaggca
cccggcatcgccacccggtcgctgaacgcggtgcgcaccttcgtggcgatgctcgacgac
ctgcgcgctctggccgaggacggctccggtcccgcggatctgatcgaggcgatcctgcag
cgctcgggctactacgccgagctgcaggacagcgacgacccgcaggacgagtcccgcctg
gagaacctcgccgagctggtcagcgtcgccgccgagttcgaggcgcaggtcgaggaggcc
gacgccgtcgccagcgagtacgaggacgccgagagcgccgagagcgccgagagcggcgag
agcgccgagagcggtgaggcggagagctccgagcccgggagcgccgagcaggggagcgcc
ggtgcccggggcacggctccgcaggaggtcgggaccgcaccggacgccgagctgaccgca
ccggatgatcccgaggcgagcctcgtggaccgcttcctggagaaggtctcgctggtggcc
gatgcggaccagatccccggcgaggaggatcagttcgtcaccctgatgacgctgcacacg
gccaaggggctcgagttcccggtcgtcttcctcaccggcatggaggacggcaccttcccc
cacaaccgcaccctgagcgatcccgacgagctcgaggaggagcgccgcctggcctacgtg
ggcatcacccgcgcccgcgagaagctctacctgacccgggcgcagatgcgctccctctgg
ggccagacccagtacatgccggccagccgcttcctcgacgaggtgcccgagagcgtgctc
gacgtggcgcgcgcgggatcgaccctcggcggggccggcttcggcggcggctactccggc
gggtcgggcggatacggcggctccggcggtcgtggaggctcgggcggccattccagcggc
ggcgggcgcggcccgtccttcagcggcggcatcggtggcgggcgcagcgacatcaagcgc
cccagcctcggctccggccgcaaggccaccccggccgaccagctcccgcagctcgcggtg
ggggaccggatcacccacgactccttcgggatggggaccgtcaccgaggtcgccgggcag
ggcgagaagacccagatcgaggtgcagttcaaggccccgcacgggaccaagcgcctggtg
ctgcggtacgccgcgatcaccaagctctga
DBGET
integrated database retrieval system
