KEGG   Blastomyces gilchristii: BDBG_00844
Entry
BDBG_00844        CDS       T06540                                 
Name
(RefSeq) 3' exoribonuclease
  KO
K12587  exosome complex component MTR3
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDBG_00844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgh03019]
    BDBG_00844
Messenger RNA biogenesis [BR:bgh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     BDBG_00844
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 8508160
NCBI-ProteinID: XP_002629598
UniProt: A0A179UAA7
LinkDB
Position
Unknown
AA seq 350 aa
MADKRRINGPPGSTRPPVFASSLLSSDGQRSVALERPIRTRKPDELRKIFLKTGLIPSAS
GSAYLEFQPSAILHRSKSKTLIPPSSSLKLTCSVHGPKPLPRSAPFSPNLLLSTHVKFAP
FASRRRRGYIRDVNERDLGVHLETALRGVIIGERWPKSGLDITVTVLEGEDDRWWGDVLS
SGPLGGIDGWGLMNVLAGCITVASAAIADARIDCMDLITGGIAAFVENPDVDTSERANTS
SKKGRGQSLVLDPDPSEHQVIVSACVVGYMPSRDEITELWLKGDTSNISAGSQSPSASHE
ALIDAAVDAARGAQAVLAEAVRESAERFAIHAGKKLALSAPDTEDVEMKL
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggctgataagagacgaataaatggacctcctgggagcacacgaccaccagtgtttgcg
tcatcgttactttcctccgacggccaacgttcagtcgctctcgagcgccccatacgtact
agaaaaccagacgaactgagaaaaatatttttaaagacgggtctgatcccatccgcttct
gggtccgcataccttgaatttcagccctccgcaatcctccaccggtcgaaatcgaaaacg
ctcattcccccatcctcctctctaaaactcacttgttctgtccatggaccaaagcctctc
ccccgctcagcaccattctcccccaacctcctcctctccacacatgtgaaattcgcacca
tttgcatcccgacgaaggaggggttatatccgggatgtcaatgagagggatcttggcgta
cacctcgaaactgctttgaggggagttataataggggaaagatggccaaagagcgggctg
gatatcacagtgacggtactagagggggaagacgaccgttggtggggcgatgttctgtcc
tccggcccactgggaggtatagatggttggggtttgatgaatgttctcgcgggttgcatc
accgtcgcctcagcagcaattgctgacgctcggatagattgcatggatcttattactggc
ggaattgctgcttttgtggagaacccggacgttgacacttcagagagagcaaatacctcg
tccaagaaaggccgtggccagtcgctagtattggatccggacccgtccgaacaccaagta
attgtgtccgcctgtgttgtgggatacatgccatcccgcgacgagattaccgaactatgg
ctcaagggcgacacctcaaatatatccgctgggtcgcagagtccatccgcaagtcatgaa
gcgctaatagatgcagctgttgacgcggcgcggggagcacaggccgttcttgcggaagct
gttagagagtcagcggagcgttttgctatacacgcaggcaaaaagctagctttgtctgcc
ccggatacagaagatgttgaaatgaagttatag

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