Blastomyces gilchristii: BDBG_00844
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Entry
BDBG_00844 CDS
T06540
Name
(RefSeq) 3' exoribonuclease
KO
K12587
exosome complex component MTR3
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_00844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_00844
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BDBG_00844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8508160
NCBI-ProteinID:
XP_002629598
UniProt:
A0A179UAA7
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MADKRRINGPPGSTRPPVFASSLLSSDGQRSVALERPIRTRKPDELRKIFLKTGLIPSAS
GSAYLEFQPSAILHRSKSKTLIPPSSSLKLTCSVHGPKPLPRSAPFSPNLLLSTHVKFAP
FASRRRRGYIRDVNERDLGVHLETALRGVIIGERWPKSGLDITVTVLEGEDDRWWGDVLS
SGPLGGIDGWGLMNVLAGCITVASAAIADARIDCMDLITGGIAAFVENPDVDTSERANTS
SKKGRGQSLVLDPDPSEHQVIVSACVVGYMPSRDEITELWLKGDTSNISAGSQSPSASHE
ALIDAAVDAARGAQAVLAEAVRESAERFAIHAGKKLALSAPDTEDVEMKL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagacgaataaatggacctcctgggagcacacgaccaccagtgtttgcg
tcatcgttactttcctccgacggccaacgttcagtcgctctcgagcgccccatacgtact
agaaaaccagacgaactgagaaaaatatttttaaagacgggtctgatcccatccgcttct
gggtccgcataccttgaatttcagccctccgcaatcctccaccggtcgaaatcgaaaacg
ctcattcccccatcctcctctctaaaactcacttgttctgtccatggaccaaagcctctc
ccccgctcagcaccattctcccccaacctcctcctctccacacatgtgaaattcgcacca
tttgcatcccgacgaaggaggggttatatccgggatgtcaatgagagggatcttggcgta
cacctcgaaactgctttgaggggagttataataggggaaagatggccaaagagcgggctg
gatatcacagtgacggtactagagggggaagacgaccgttggtggggcgatgttctgtcc
tccggcccactgggaggtatagatggttggggtttgatgaatgttctcgcgggttgcatc
accgtcgcctcagcagcaattgctgacgctcggatagattgcatggatcttattactggc
ggaattgctgcttttgtggagaacccggacgttgacacttcagagagagcaaatacctcg
tccaagaaaggccgtggccagtcgctagtattggatccggacccgtccgaacaccaagta
attgtgtccgcctgtgttgtgggatacatgccatcccgcgacgagattaccgaactatgg
ctcaagggcgacacctcaaatatatccgctgggtcgcagagtccatccgcaagtcatgaa
gcgctaatagatgcagctgttgacgcggcgcggggagcacaggccgttcttgcggaagct
gttagagagtcagcggagcgttttgctatacacgcaggcaaaaagctagctttgtctgcc
ccggatacagaagatgttgaaatgaagttatag
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