Blastomyces gilchristii: BDBG_00917 Help Entry BDBG_00917        CDS       T06540                                  Name (RefSeq) regulator-nonsense transcripts 1   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism bgh  Blastomyces gilchristii Pathway bgh03013   Nucleocytoplasmic transport bgh03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:bgh00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     BDBG_00917    03015 mRNA surveillance pathway     BDBG_00917  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bgh03019]     BDBG_00917 Enzymes [BR:bgh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      BDBG_00917     5.6.2.5  RNA 5'-3' helicase      BDBG_00917 Messenger RNA biogenesis [BR:bgh03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      BDBG_00917    mRNA cycle factors     Common to processing body (P body) and stress granule      BDBG_00917 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD Viral_helicase1 UvrD-helicase SLFN-g3_helicase PIF1 Helicase_RecD NPHP3_N nSTAND3 AAA_22 ATPase Ribosomal_S13_N AAA_16 PhoH Motif Other DBs NCBI-GeneID:  8507080 NCBI-ProteinID:  XP_002628009 UniProt:  A0A179U8M2 LinkDB All DBs Position Unknown AA seq 1092 aa AA seqDB search MEAFNYMGNHLVSDSASTINAGDDMSTIDGDESILNLATGPRKRQHDDEDEISDSFEDDD LESMASVPVDGIKTTATKPEEEKELPVHSCAYCGIHNPSSVVKCLTCTKWFCSARGNTSS SHIVNHLVRARHKEVQLHPESSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPC AAMPSSKDMNWDTSRWQPLIEDRSFLPWLVSSPSDQEQLRARHLSPQMIAKLEEMWKDNA SATVEDLEKATGVDDEPAPVLLRYDDAYQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVR WDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEV TIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGN EVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYN LAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNN DSNIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKF KFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERL VILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMF WSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQ ATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKY GLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFPRPKQAYRGPQRFQV AYNHASNMASGMVNGRNGHRGDYHDTGSVASYIPDDVSSVHSSALGGVAIPSGYPHMFRN FADPWPQLPGHRRANGSRGKGAPSVTGESVAATESDITGSVVGQGGVSLSGLSIHDMNKQ ASMSQSDRLKRYVESGGRAEPYKPGPSDNGSIFGGSSASIRVPRGGRGNPADDDDARSVS TAFASQIGGNYD NT seq 3279 nt NT seq  +upstreamnt  +downstreamnt atggaggcttttaactatatgggaaatcatctagtttcagactctgcttctacgattaac gctggagacgacatgtctaccatcgatggcgatgaaagcatcttaaatttagccaccggg cctcgaaaacgacaacatgatgatgaagacgagatatcggatagcttcgaggatgatgat ttggaaagcatggctagcgtccctgtcgatgggatcaaaacgaccgccaccaaaccggag gaagaaaaggaactacctgttcactcatgcgcttactgtggaattcataatccaagcagc gtagtgaagtgcttaacttgcaccaagtggttttgcagcgcgcgtggcaacacctcctca tctcatatcgtcaatcacctagtcagagcaaggcataaggaagttcagctgcaccccgaa tcgtcgcttggtgacacaattctcgaatgctacaattgtgggacgaaaaatgttttcctt ctaggctttattcccgccaaatccgacactgttgtggtgctactctgtcggcaaccttgc gctgcgatgccttcctcgaaagatatgaactgggatacgtcccgctggcagcctcttatc gaggaccgttcctttttaccatggctcgtgagctctccgtctgaccaagaacaacttcgc gcgcggcatctaagccctcaaatgatcgcgaagctagaggagatgtggaaagataatgca tcggctactgttgaagatctcgagaaagcaacgggtgttgatgacgaacctgcgccagtc ctccttcgatatgacgacgcttaccaataccagaacgtattcggcccccttgtgaagatc gaagccgactatgatcgcaaattgaaagaggcccaatctcaagacggcttggttgtgcgg tgggacctaggactgaacaacaagcatctggcgagttttgttctcccgaagctggaactt ggcgatgtgaagttggctgttggtgatgaaatgcggcttaaatatactggagagctgcga cctaaatgggatggagtaggatacgtcattaaaattcctaacaatcagtctgacgaggtt actattgaattgcgaaccaaaggcgatcataaatctgtccccactgactgcacgcataat ttcacagctgattatgtttggaaggcgacatcctttgaccgaatgcagctagccatgaaa acatttgctgttgatgagatgagcgtttcgggttacatcttccatcgacttttggggaat gaggttgccgctgggcctatgagaactcaaatgcccaagaagttcagcgtgccaggtctt ccagacctcaacagcagtcagactaatgctgtgaaaagcgtccttcagaaacctttgagc ttaattcaaggacctcctggcactgggaaaaccgtcacttcagctaatattatttataac ctggcaaaaataaacggcggccaagtgttagtctgcgcaccgtctaatgttgcggttgac caactttgcgaacgcatccacagaactgggctgaagactgttcgggtcactgccaagtca cgagaggatgtggaatcccctgtgggtttcctttcccttcatgaacaggtccataacaat gacagcaatatcgaacttgtcaaactcaatcaactgaaggctgagctgggtgagctttct agccaagatgagaaaaagttcaagcaacttgttcgtgctgcggagaaagagatcttgagc aatgcggatgttatttgctgtacctgcgttggtgctggcgatccacgcctcgcaaagttc aaattccgaaccgtccttattgatgaatctactcaatctgcggaacccgagtgcatgatt cccctcgtcctaggatgcaagcaagttgttcttgttggcgaccatcaacagctaggacct gttatcatgaacaagaaggcggcaaaagctgggctcaaccagtctctatttgagcgcttg gtcatccttggatgcgcgcctatccgtctcaacgtgcagtatcgcatgcatccatgtcta tccgagttcccttcaaacatgttctacgatggatccttgcagaacggtgtgacagagtct gaacgtcttcttaaggacgttgatttcccctggcctgtggcgcacaaccctatgatgttc tggtcaaacctaggaaatgaggaaatttcggcatcaggaacgtcatatttaaatcgtacc gaagctgccaacgtggagaaaattgttaccaggtttttcaaagctggcgtgaagccttct agcatcgggattattaccccgtatgaagggcagcgtagttacgttgtcagctccatgcag gcaactggcactttcaagaaggaactttacaaagaaatcgaggtggcgtcagttgatgct ttccaaggccgagagaaagattatatcgtgctctcctgtgtcagatccaacgaccatcag ggaattggatttttgagtgacccacgtcggcttaatgtcgcgcttacccgtgccaaatat ggactagtcatcctaggcaacccgaaagttctatcgaagcatcctctgtggaactacctt ctactgcatttcaaagagaagaactgcctcgtggaagggccgttgtcaaacttgcaggtg tcccttgtccaattccctcgtccgaaacaggcctaccgcggaccacagcgtttccaggtg gcttataatcacgcctctaacatggccagtgggatggtcaatggcaggaatggccatcgc ggtgactatcatgacacgggatctgtggcgagttacatcccagatgacgtctcctcagtt cattcatccgctctcggaggggttgctattccatctggatatccccacatgttccggaac tttgccgatccctggccgcaacttccaggccaccgccgtgccaatggatctagaggtaaa ggcgcgcctagcgttactggcgagtctgtcgcagcaactgagtccgatatcacgggcagt gtcgtcggacaaggcggcgttagcctctccggtttaagcattcacgatatgaataagcag gcaagcatgagccagtctgaccgcttgaaacgctacgtcgaatctggtggtcgtgcagag ccatataaacctggccctagtgataacggcagcatctttggtggaagttcggcgagcatt cgtgttcctcgtggcggccgcggtaacccagccgatgatgatgacgcacgcagtgtctcg acagcttttgcaagtcaaattggtggaaactacgactga

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