Blastomyces gilchristii: BDBG_01220
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Entry
BDBG_01220 CDS
T06540
Name
(RefSeq) RNA binding protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BDBG_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgh03041
]
BDBG_01220
Spliceosome [BR:
bgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
BDBG_01220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
42527995
NCBI-ProteinID:
XP_031576343
UniProt:
A0A179U9P0
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MSYHRADASALLDNRGYTGPLIRGANPATLFEKAVRDRITDSYYWKEQCFGLNAATLCDR
AVELTYIGGTYGLAQKPTPFLCLAFKLLQLAPEKDIVLEYLNFHDPENERVEGGEGNGLE
EEQDANDGVVKAVGDFKYLRALAAFYIRLTFDAADIYRTLEPLLVDYRKLKRRTKDGFML
TYIDQFVDDLLTKDRVCGTSLWKLPSRTQLEDLDILEERISPLAEELEDIDRDSNGSQDS
GEASSRGEDA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaccgcgccgacgccagtgcgctgctggacaatcggggttacacggggccc
ttaatccgcggtgctaaccctgccacactattcgaaaaggccgttcgtgatcgcatcacc
gactcatactactggaaagaacagtgcttcggcctcaacgctgcaactctctgcgatcgc
gccgtggaacttacctatatcgggggaacatacgggcttgcgcaaaagccaacgccattc
ttatgtttggcctttaagctactccagcttgcaccagagaaagatatagtgttggaatat
ttgaactttcatgacccggaaaatgaacgtgttgagggtggcgaagggaatgggttggag
gaggaacaggatgctaatgatggcgttgtcaaagcagttggagacttcaaatatcttcgt
gcgctagcggctttttatatccggcttacctttgatgctgcggatatatacaggactctc
gagccgctgttggtggattaccggaaactgaagaggaggacaaaagacggctttatgctc
acgtatattgatcagtttgtggacgatttgcttacgaaggaccgcgtatgtggtacgagt
ctatggaagttgccttcgaggactcagttagaggatctggatattcttgaagaaagaatc
agtccgttggcggaggagttggaggatattgatagagattcaaatggaagccaggacagc
ggggaagcatccagccgtggcgaagatgcctga
DBGET
integrated database retrieval system