Blastomyces gilchristii: BDBG_01412 Help Entry BDBG_01412        CDS       T06540                                  Name (RefSeq) alkaline phosphatase D   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism bgh  Blastomyces gilchristii Pathway bgh03008   Ribosome biogenesis in eukaryotes bgh03018   RNA degradation Brite KEGG Orthology (KO) [BR:bgh00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     BDBG_01412   09123 Folding, sorting and degradation    03018 RNA degradation     BDBG_01412  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bgh03019]     BDBG_01412    03009 Ribosome biogenesis [BR:bgh03009]     BDBG_01412    03016 Transfer RNA biogenesis [BR:bgh03016]     BDBG_01412    03036 Chromosome and associated proteins [BR:bgh03036]     BDBG_01412 Messenger RNA biogenesis [BR:bgh03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      BDBG_01412   mRNA degradation factors    5'-3' decay     5' exonucleases      BDBG_01412 Ribosome biogenesis [BR:bgh03009]  Eukaryotic type   Pre-60S particles    RNases     BDBG_01412 Transfer RNA biogenesis [BR:bgh03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     BDBG_01412 Chromosome and associated proteins [BR:bgh03036]  Eukaryotic type   Gene silencing    piRNA pathway     BDBG_01412 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N XRN1_D2_D3 XRN1_D1 SH3_12 Peptidase_C92 RyR Cwf_Cwc_15 Motif Other DBs NCBI-GeneID:  8507246 NCBI-ProteinID:  XP_002628504 UniProt:  A0A179UAA1 LinkDB All DBs Position Unknown AA seq 1440 aa AA seqDB search MGVPKFFRWMSERYPAISQLIAENRIPEFDCLYLDMNGIIHNCTHKDSDSPTFRMTEDKM FIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARRFRTALDAEVAKEKAIKQGI EMPKEEAFDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHK IMEYIRQSKAQPGYHPDVRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSQKKSKE LEHQNFYLMHLCMVREYLELEFQELEEADALQFPFDLERVIDDFILMAFFVGNDFLPNLP NLHINEGALAWMFKIYKQVLPKLGGYINEQGTINLERLGVLLDSLSDVEFRFFEAEYSDA RWIKSKMKGQEPENSESPANAKDFTISPAQKHIFNRIKKYVTHRPVNDEGQPIPLDLSSS LPARDRKFVEQLADDLHLAWTTVSNEHGDRFLRVQLPSKETQSSGSSGDEDDGDDEEGQI ALLRVMKRYENAKVKETTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGLDNHEEMRKLT ENYVQGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLGQPFRPFEQLMG VLPDRSKQIVPAAFHELMTSPESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLG AMATKQHLLTPAERARNEFGVTLKFTYSPDIEYTYPSSLVGVFPDIAKCHCIENVFDLPT MEGLEPVVGLVEGVKLGHEALAGFPSLKTLPHNGQLGFHGVSVFQQESRNESMVVTLSAP ENRSSVELAKQKLGQRVHVGYPFLQEAKVSRVSDELFDYMYVDGEQHVVSIPHAPSQIDQ WRRKTHQIESYYSKRLGMVVGDIESMVHVQMLKGLMKTDEGATVKEFADIPGIETDYALQ LVVDQVMCEDDRFIEREALPVEEEFPEGTRAFFLGEYNYGAPVHITGHEDGKLSGLVSVV KGKEPEFGRDLTRAAERLSPYSPSFAIARSLNLNPLTLAKITSSFTVVLDSQRINLGLNL KFEARKQKVLGYSRRGPSGWEFSEKAIGLIQQYMIKFPEFIAGIQRKPQGDGFQATDFYP PETAAAKIKEIQAWLKSIEAKHFERVPLEAEQLDSDLVKSIEQAADELVRTRPAPEAKKM KGVPRNALLKPADAEHRLGNQSFSLGDRVVYAQESGKVPIATRGTIVGLTRTSRTLLLDI VFDVSFMSGTTLGDRCSPFRGSTVPASCVLNVTNRQLVATTRAAAEQGRSQQQRQQQPLT VQGYGAPLGPGGKGQLEHAPTPPPLRGSFRGAVTGQLGASRGIGTFRGRGGHGQSEQTLP IRNHYPTSGSPQPPKDIRGRGGRANFGSNQNGYSPRGLRGGPRGGIGASPATRAGYVSVE RVDPQEDVVQHNPNFRPRSYNNVPPPSSLERGGSGRGRGGRGFARGGGRGVSRGQGTTSA NT seq 4323 nt NT seq  +upstreamnt  +downstreamnt atgggtgttccgaagtttttcagatggatgtccgagcgataccccgcaatatcgcagttg attgcagaaaaccgcatccctgagttcgattgcctatacctcgatatgaatggcattatc cacaactgcacccacaaggattcggactcgccaacctttcgcatgacagaagataagatg ttcatcgctatttttaactatatagaacatctatacgggaagatcaagccgaaaaaattg tttttcatggctattgacggagtcgcaccgcgcgcgaaaatgaaccaacaacgagcgaga cgattccgaacagcgttagatgcggaagtggccaaggaaaaggctatcaaacaggggatt gaaatgccaaaggaggaggcctttgatagcaactgcataacaccgggaaccgaattcatg gccaagctgacacagcagctgaagtatttcatcaataagaaggtctcggaggatgtggaa tggcagggcgtggaaatcgttctgtccgggcatgaggtccctggcgaaggagagcataag atcatggaatatattcggcagtcgaaagcacaaccaggataccatccagatgtacggcat tgtctatacggcttggatgcggatttgatcatgttgggtctactaagtcacgatcctcat ttctgtttactccgtgaagaagtaacgtttgggagacaaagtcagaaaaagtccaaggag ctagaacaccagaatttctatcttatgcatctttgtatggtaagggaatacttagagctg gagtttcaggagttggaagaggccgacgctttgcaatttccttttgatttggaacgagtt atcgacgatttcattcttatggcgtttttcgtgggaaatgacttcttaccaaacctgccg aatttacacatcaatgagggggcgctggcttggatgttcaagatttacaaacaagtttta ccgaaactgggaggatacataaatgaacagggaacaatcaatttagagcggctaggagtt ctcttagattcgttatccgatgtcgaattccgtttctttgaagcggaatattcggatgcc cgttggattaaatccaaaatgaaaggccaagagccggagaactcagagtcaccagcaaat gcgaaggattttacgatttcacccgcacagaagcacattttcaaccgaatcaaaaaatat gtcacacatcgcccggtgaatgatgaagggcaaccaattcctctcgacctctcctctagt ttaccagcgagggatcgcaaattcgtggagcagttagcagacgatctgcaccttgcgtgg actaccgtgtccaacgagcatggtgatcgatttttgcgggtacaactgccgtcgaaggag actcaatctagcgggagctctggcgacgaagatgatggtgacgatgaagaaggtcaaatt gcccttcttcgcgttatgaagagatacgaaaacgccaaggtgaaggaaacgacggcagag gaagctcagcaagcagctgaaaaaaaatacgagctcaagttccaggagtggaagaacgac tactacaagtccaaattcgggtggggcttggataatcatgaagaaatgcgaaagttgacc gaaaattatgtgcaaggccttcagtgggttctctattattattatcgcggagttgcctcc tggccttggttctatcaatatcactattcgccgatgatttctgatgtcaaatttggcttg aaagctgatatgaatttcgaccttgggcaacctttccgccctttcgaacagttaatgggt gttctaccggaccgaagcaagcaaattgtccctgcggccttccatgaattgatgacttct ccagaatccccgatcatcgacttttatcctcgcgacttcgaacttgacatgaatggtaaa aagatggagtgggaagccgttgtcaagattccgtttattgatgaaaaacgcctgcttggc gcgatggccacgaagcaacacttgctgaccccagcagagagagcaagaaatgaatttggt gttacgttgaaattcacttattccccagatatcgaatacacatatcccagttcacttgtt ggcgtgtttcccgacatcgccaagtgtcactgcatagaaaatgtgtttgacctcccaaca atggaaggtctagaacctgttgttggccttgtagaaggcgttaaactgggtcacgaggca ttggcagggttccctagcttgaaaacattgccacacaatgggcagctaggcttccacgga gtatccgtgtttcaacaggagagtcgtaacgagagcatggtggtaacgctcagcgcgcca gaaaaccggtccagtgttgaactggcgaaacaaaaacttggtcagcgagtgcacgtcggg tacccattccttcaggaggccaaagtgagtcgcgtgtctgacgaacttttcgattacatg tatgtcgatggagagcagcatgttgtttctattccgcatgctccctcccaaatagatcag tggagacgcaaaacccaccaaattgagtcatactatagcaaaagactcggcatggttgtt ggcgatatcgagtccatggtccacgtgcagatgctgaagggattaatgaagacggacgaa ggcgccacggtcaaggagttcgctgatatccctggtattgaaacggattacgctctgcag cttgttgttgaccaggttatgtgcgaggatgatcggtttatcgaacgagaagctttacct gtcgaggaggaattcccggagggaacaagggcctttttcctgggtgaatacaactatgga gcgccagtgcatattactgggcatgaggacggaaaattgagtgggcttgtttccgtcgtc aaaggcaaggaaccggaatttggtcgagatctcacaagagctgccgaaaggctctctccc tacagcccatcgttcgcgattgcccgcagtctgaatctgaaccccctgacgctggccaaa atcacgtcttcgttcacggtggtcttggacagccaacgtatcaacctaggactcaatctg aaatttgaggcgaggaagcagaaagtgcttgggtattctcgacgcgggcccagtggatgg gaattcagtgagaaagccatcggtcttatccagcaatatatgatcaaattccctgaattc atcgcaggcattcaacgaaagccacaaggggatggcttccaggctacagatttctaccca ccagaaacagcggctgccaaaatcaaggagattcaggcatggctcaagtctatcgaggcg aagcatttcgaacgtgtaccgttggaagctgaacagctcgattcagaccttgtgaaatct attgaacaggccgcggacgaactcgtccgtactcgacccgcacctgaagccaaaaagatg aaaggcgtcccgcgtaatgcattattaaagccagctgatgcggagcatcgactaggcaac cagtcattttctcttggtgatagggtggtttatgcacaggaatctggcaaggtccccatc gccacaagagggactatcgttgggctcacgcgcacatccagaacacttctcctggacatt gtgtttgacgtctcctttatgagcggcacaactctgggggacagatgctccccattccgc ggttcgaccgttcccgcatcatgcgttctaaacgtgaccaacagacaacttgtcgcaacg acccgcgcggcggctgaacaaggcagatcacaacaacagcgacaacaacagccactaacc gttcagggctacggagctccactcggaccaggcggaaagggccagctggaacatgctccc acccctccgcctctacgaggcagtttccgtggcgctgttacaggtcagttaggtgcgtcc aggggcattggaacgttccgtggccgtggtggccacggccagtcggagcaaacattgccg attcgcaaccactatccaaccagtggctcaccgcaaccgcctaaagacattcgcggccgg ggtggtcgggctaattttggcagtaatcagaatggatatagcccccgtgggctacgtgga gggccacgtggaggtattggtgcgtcgcctgcgactcgcgctggctatgtttcggttgag agggtggacccgcaagaagatgttgtgcagcacaacccgaatttcagacctcgatcttac aataacgttcctccgccatcgtctttggaacgtgggggaagtggtcgtggtagaggcggt cgtggttttgcacgcggtggtggcaggggtgttagtcgtggccagggaaccacatctgcc tga

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