Blastomyces gilchristii: BDBG_02190
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Entry
BDBG_02190 CDS
T06540
Name
(RefSeq) zinc knuckle domain-containing protein
KO
K12597
protein AIR1/2
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_02190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_02190
03016 Transfer RNA biogenesis [BR:
bgh03016
]
BDBG_02190
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
BDBG_02190
Transfer RNA biogenesis [BR:
bgh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
BDBG_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
8510347
NCBI-ProteinID:
XP_002627519
UniProt:
A0A179UF24
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MYEDDCDSRTASVGLLRTRKKHAFSESKKISSIGTSEKRRSGKNLTLGRRDIQDFVPKGT
SFTSTLLEVDSSSSSSPDTAMENKSSDDTTTDLVPSSVSPPASRGMAPAMNWNKLSKGTV
RTALRGRRQADTPDSSAANSFEAVNGKYWRSRSASASSAGSGDGEHHRRMHGQGQSDSET
DACRSKAHVGTNVGQKTFTAEFSDMDSGDDTDGNNDIVLNLSGLPKTDERIEATGELHGP
GREMAHQGSDVPGVQKLNGEILSEPHGSNLSVQTENKLPEDEIYCDGNRGNALSGGPKAE
AIRLFRAKYPSDPTTLADLTRVDLETQARYIFLDLEPEDLDLSLPITCIDCMKEGHLADI
CPNKECEHCGAWSVHESRFCPSRRRCQRCRERGHDAEACSSLLKGSAAEEPCDFCGSGDH
TECECDLIWKLPKRNPTSGRIFISISCCHCTSNRHLVGDCPTRNFPMNSSSFSLKHFDPS
MFSNLNTFPVTISGKGTSNQRNSGYKIRGRARGHSPSPESDGAFGQPDSWNPTTHRSPPR
GRIRFSNGIGRGRNLDDDTRRPQGSGKGPQNPNDYRRDYRERDQYFGNNTRQRSLSPIRP
STRQGNGASSWQPRARGGGNGGGGGSRGRGRGVKRGSNRETYRPMPSAAQKAWDQHRL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggatgattgcgactcgcgtacagcctctgttggtttgctgaggacccgaaaa
aagcacgccttctctgaatctaagaaaatatcctctatagggacatctgagaaacgccga
tcaggaaagaatctcacgttaggtcgtcgcgacattcaagactttgtccccaaaggcaca
tcatttacctctacactgctagaagttgatagctcatctagctcgagtcccgatacggcc
atggagaataaaagcagtgatgacaccaccacggacctcgtgccatcatccgtttcgccg
cccgcatctcgaggaatggcacccgcaatgaattggaacaaactcagtaaaggcactgtc
aggaccgctcttcgtgggcgacgccaagcggacacgcctgattcatctgcagcaaattca
tttgaggctgtcaatgggaaatactggcgcagtcggagtgcgtctgcttcgtctgccgga
agtggcgatggtgagcatcatcgccgaatgcacggacaaggccaaagcgactccgaaaca
gatgcttgtcggagtaaggctcatgtcggaacgaatgtaggccaaaagactttcactgca
gagttctctgatatggattctggagatgacacggatggcaataatgacatcgttcttaac
ctgagtggtttgcctaaaacagatgagaggattgaggccactggggagctacatggtcct
ggccgtgaaatggcccaccaaggtagcgacgtgccaggcgttcaaaaacttaatggggag
attctcagcgaaccacatggctcgaacctctctgtgcaaactgaaaacaaactaccagaa
gacgagatttattgtgatggtaatagaggaaacgccttgtctggaggcccaaaggccgag
gcgattcgtttgtttcgcgcaaagtacccttcagatcccactacccttgctgatctcact
cgtgttgatttggagactcaggctaggtatatatttctcgatttggagccagaagatctt
gacctcagcctgcccataacatgtattgattgtatgaaggaaggtcatctggcggatatc
tgtcccaataaggagtgtgaacattgcggagcatggtctgttcatgaaagtcgattttgt
ccttcccggcgaagatgccaacgttgcagagaacggggtcacgacgcagaagcgtgctct
tctcttttgaaaggctcagccgcggaagaaccctgtgacttttgtggttccggcgaccat
accgagtgcgaatgtgacttgatatggaagctccccaagcgaaacccaacctcaggccgc
atatttatttccatatcctgctgtcactgcacgagtaatcgccatctggtcggagattgt
cctactcgcaactttccaatgaactcttcttccttcagtcttaaacattttgacccctca
atgttctccaacctaaacaccttccctgttaccatttctggcaagggaactagtaaccag
agaaattctggatacaagatcagaggccgcgcgagaggccattcaccatctcccgagagc
gatggagctttcggacaaccagatagttggaacccaacaacacaccgttcacctccacgt
ggacgcatacgcttcagcaatggaattgggcgtggcaggaatcttgatgatgatacacgt
cggccccaaggctccgggaagggaccgcaaaaccctaatgattatcgccgtgattataga
gaacgagaccaatatttcggtaacaatacgcgtcaacgctctctgtcgcctatccgacct
tcaacccgtcaaggcaacggggcaagcagttggcaacctagggctagaggtggtggtaat
ggtggtggaggtggatctcgaggtcgtggaagaggggtcaaaaggggttcaaatagggaa
acatatcgacctatgcccagcgcggctcagaaagcatgggaccaacatagactctga
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