Blastomyces gilchristii: BDBG_02279
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Entry
BDBG_02279 CDS
T06540
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03440
Homologous recombination
bgh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BDBG_02279
03450 Non-homologous end-joining
BDBG_02279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgh03032
]
BDBG_02279
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_02279
DNA replication proteins [BR:
bgh03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
BDBG_02279
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
BDBG_02279
BRCA1-C complex
BDBG_02279
NHEJ (non-homologous end-joining)
MRX complex
BDBG_02279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
Hydro_N_hd
AAA_13
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
8506628
NCBI-ProteinID:
XP_031576982
UniProt:
A0A179UDR0
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MLGSLAGGGLCRQVNSRQCQPPRAASALPRPVPTSLAASLLYAIVGAAVVKGRHPAGAYR
PGWNLSHKTRSRDVVPRPSQSIRVEREGSISPRTPLRRKPTSSRFPQRPTLQAGLTRSGF
RKLDLARCVSSPTSSPSSNVANNTQAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYN
GSGKTTIIECLKYATTGDLPPNSKGGAFIHDPKLCGEKEVLAQVKLSFKSMSGARMVATR
SLQLTVKKTTRQQKTLEGQLLMVKDGERTSISSRVAELDQIMPQYLGVSKAILDSVIFCH
QDESLWPMSEPSVLKKKFDEIFEALKYTKAIDNIKALRKKQNEELSKFKIMEQHAKENKD
KADRAEKRSIKLQEEIEALRAESHELSQQMRKAAELADKAWKESESYAQILGTLEGKRIE
AKSIQASITNLQEHLVEVDESDEWLERTLDQFESQQIQYREQEESLKEKYMELKQVIEDN
RTRLGLKQAEYGKHENDKAQFERQLRRREKLIKEIARQNNIRGFDDDLDDMQVSDFMQRI
RKLSKDQNQTLERARREAQMELREVQSLLNQLSQRKSTLQEVKNASRKQISSNDIEADSH
QRRLDEIDIDEGSKAVLESRIEETERSLHEAKEKAKAASWDSAIQGKTSEIRLLEDESSK
LNAELIEGTKRAGDLARLDHLKKELKDRERSLETMEGAHSDRIKKFLTREWNPSTLDQEY
QRALQETTNALTRVERDRDGVSRELEHAEFKLKTTRKDLQQRRNELKQCIQKIRDAVDDE
PAEYPDILKQRQVQLDMAKKDADQYAGLGEYLSKCMDAAKQKKVCRMCSRPFKTEGEFQI
FLNKLDALVKRATQDAVDESMQQLEEDLEAAQGVSTFYDTWVRLSTTEIPALEKEESQLE
SQREELLSQIEDHDKIVSERVESKKNVESLSKTVATISKYDGEIKTLRSQVQDLLANQQD
VSGSRTLEDIQEQISAIGEKSRELQKIISKLNNEKDQSRTEITALELKLRDVRSNLDNAN
YQLEKKASLAARVEEYRKLNAKHRESIEKADHDIESLVPEVSKAQARYDDIASRAEAREH
ELQLEASQLSDSLHQLDLANEEITSYNERGGPAQLIKCEKEVHNLESEIASLEKEQGSIT
KDINAISTRLKDSENTKRQYADNLRYRRETAALEDVNATIEELSAQNAEVDRSRFREESE
RRTREHNALSARQASKMGEMKSKDDQLMQLLADWNTDYKDATVKFKEAHIKVETTKAAVD
DLGRYGSALDKAIMKYHSLKMEEINRIIEELWQKTYRGTDVDTILIRSDNENAKGNRSYN
YRVCMVKQDAEMDMRGRCSAGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIR
SLAESLHDIIKSRQQQANFQLIVITHDEEFLRHMQCGDFSDYYYRVSRNERQKSIIERQS
IAAVM
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtagccttgcggggggtggcttgtgccgacaggtcaacagccgtcagtgccag
cccccaagagccgcttcggcactcccccgccccgtgccgacctcgcttgctgctagcctc
ctctacgcaatagtaggggccgccgtagttaaaggtcggcaccccgctggagcttatcgg
cccggctggaacctctctcacaagacaagatcacgtgatgtcgtgcctcgcccaagtcag
tctatccgcgttgaacgcgaaggcagcatttctccacgaacgcccttgagacgaaagcca
accagtagccgttttccacaacgtccaacgctgcaagccggcctgacgaggagcgggttc
aggaaacttgatttagcaagatgtgtgagttcgcctactagcagtccgtcttccaacgta
gctaacaacactcaagcgaaaattgacaagttatctattcttggtgtgcggtcgtttgac
aacacccgcagcgaaactatccaattccataccccgttgacactgatcgtcggctacaat
ggttccgggaagacgaccatcattgaatgcctcaaatatgcgactactggagacctcccc
ccaaatagtaaaggcggtgcctttattcacgatccgaagttatgtggcgagaaagaggtc
ctggcgcaagtaaagctctcgttcaagtctatgtcgggagcgaggatggttgcgacacgc
agtcttcagcttaccgtgaagaaaacgacgagacaacagaaaaccttggaaggccagctc
ctgatggttaaggacggcgaacgaacgtccatttcttcgagagtggccgaacttgatcag
attatgcctcagtatctaggtgtttcaaaagccatcctcgactctgtcatcttctgccat
caggatgagagtctgtggccaatgagtgagccctccgttctaaagaagaagttcgacgag
atatttgaagccttgaagtacacaaaggctatcgataatatcaaagcacttcggaaaaag
cagaatgaagaactctctaaattcaagatcatggaacagcatgcaaaagaaaataaggat
aaagctgaccgcgcggaaaaacgatcaatcaaattgcaagaggagattgaggcgctacgt
gctgagagccatgagctctcacagcagatgagaaaagccgcagaactagcagacaaggcc
tggaaagagtcggaaagttatgcgcaaattcttggcacattggaaggaaagcggatagaa
gccaagagcatccaggccagcatcaccaacctacaagaacatcttgttgaggtggatgag
tccgatgaatggcttgaaaggactttggaccaattcgagtcacaacaaatccagtatcga
gaacaagaagaatcgctcaaggaaaaatatatggagctcaaacaagtgattgaagacaat
cgaacaaggctagggcttaaacaagctgaatatggcaaacacgaaaatgacaaggctcag
ttcgaacgacaacttagaaggcgcgagaaattgattaaagaaattgccagacagaataac
attcgtgggtttgacgatgacctcgacgacatgcaggttagcgatttcatgcagcgaatt
cgaaagctatctaaagatcaaaaccaaactttagagagagcccgacgggaagcccagatg
gaactgcgtgaagtacagagccttctaaaccaactcagccaacggaaatcaaccctacaa
gaagtgaaaaacgcttcaagaaagcagatatcgtctaatgatattgaggcagattcccac
caaaggcgtctagatgaaattgacatagatgagggtagtaaagctgttttggagtcaaga
attgaagaaaccgaacgttccttacatgaagcgaaggaaaaagcaaaggccgcatcttgg
gacagtgcgatccaaggcaaaacctccgaaattcgattgttggaggatgagagctcgaaa
ctgaatgcggagctgattgaagggaccaagagagccggggatcttgcgcgactagaccat
ctcaagaaggagcttaaggatcgcgaacgcagcctcgaaactatggaaggggcacacagt
gacagaatcaagaaatttttaactcgggaatggaatccatctacactcgatcaggaatat
caaagagcattgcaggaaaccaccaatgcattgacccgcgtcgaacgtgatagagatggt
gttagtagggaactagaacacgctgagttcaaattgaaaacaacccgaaaggatctccag
cagcgtcgaaatgaactgaaacaatgcatccaaaaaatacgtgatgctgttgacgacgaa
cccgccgagtatcccgacatacttaagcaacgacaagtacagcttgatatggctaagaag
gatgccgatcagtatgctggcctgggagagtacctcagcaaatgcatggacgcagctaag
caaaagaaggtatgccgaatgtgttccagacctttcaaaactgaaggcgaattccaaatt
ttcctcaataagctcgatgctctagtaaaaagagctacgcaggatgctgttgatgaaagc
atgcaacagctggaggaagatctagaggcagctcaaggtgtttctaccttctatgacact
tgggttcgcctttccaccactgagattccggcgcttgaaaaagaggagtctcaacttgag
tctcaacgagaggagttgctatcccagatcgaggaccatgacaagatcgttagcgaacgc
gtggagtctaaaaagaacgttgaatctctatcgaaaacagttgcgacgatttcaaaatat
gatggtgaaatcaaaacccttcgatcgcaggtccaggaccttttggcaaaccaacaagat
gtcagcggctcccgaacattggaagatatccaggagcagatttctgcgattggagaaaag
tctcgcgagcttcagaaaatcatttcgaagttgaataatgagaaggatcagtcgcgaacc
gagatcacagcccttgagttaaaacttcgagatgtgcgaagcaacttggacaatgccaac
tatcaactagagaagaaagcgagcctcgctgcccgtgtcgaagaatatcgtaagctgaat
gctaaacatcgtgaaagcattgaaaaggcggatcatgatattgagagtcttgttcctgag
gtttcaaaagcacaggctaggtatgatgacattgcctctcgggctgaagctagggaacat
gagctacaactagaagcatcccagctgtctgacagtttgcatcaacttgacctggcgaat
gaagagatcacctcttacaatgagcgaggcggtccggcacaattgatcaagtgtgaaaaa
gaagtacacaacttagaatcggaaattgcgagcttggaaaaagagcaggggtcaataacc
aaggacatcaatgcaatttcaaccaggcttaaagatagcgaaaacacaaagcgacagtac
gctgataatcttcgataccggcgggaaacagcagcactcgaagatgtaaacgcaaccatt
gaggaattgtccgcccagaatgcggaagtggatcgcagccgttttagggaggaatcggag
cgacgaacacgagagcacaacgccctatcagcgagacaggcgagcaagatgggggaaatg
aagtcaaaggatgatcaactcatgcagctgttggccgactggaataccgactataaagac
gctacagtcaagttcaaagaggcccatatcaaggtagaaacaacgaaggcggcagtcgac
gatcttggtcgctatggtagtgctcttgataaggctatcatgaagtatcacagtctaaaa
atggaggaaattaaccgtattatcgaagagctctggcagaagacgtataggggaacggac
gtggacactatcctaatccgctctgacaacgaaaacgccaagggaaaccgatcctacaac
tatcgcgtctgcatggtaaagcaagacgcagagatggacatgcgtggccgctgcagtgca
ggccagaaggtcctcgcgagcatcatcatacgtcttgcccttgcggaatgctttggtgtc
aattgcggcctgatcgcgctggacgagcccacgacgaatcttgacagagataatattcgc
tcccttgccgaatcgttgcatgacattatcaagtcacgccagcagcaggctaatttccag
ctcattgtcatcacacatgatgaggagttcctgcgacatatgcagtgtggtgattttagc
gattactactaccgcgtttcgaggaatgagaggcagaaatctattattgagagacaatct
attgcagctgtcatgtaa
DBGET
integrated database retrieval system