Blastomyces gilchristii: BDBG_03158
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Entry
BDBG_03158 CDS
T06540
Name
(RefSeq) mRNA 3'-end-processing protein rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BDBG_03158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_03158
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
BDBG_03158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
HAT
Motif
Other DBs
NCBI-GeneID:
8506140
NCBI-ProteinID:
XP_002626981
UniProt:
A0A179UH27
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MAEDEAEKAFFQAQSLNADIASYEAAGDQDGDSSDSDDYDPSKTVQNHQDQYSAQLTDSK
PSAVSNTSSLSASLKRRSMSQDFSEAVQNSHTFPPSQIPSGSEPGDPTPLPPSNTSAPVQ
VSSQSIGNFVVGEDSDEDRGEAEYEPPAALSHVHGGDGGDDGNEGNDDDNVASDPSGSRQ
HSLSQNANENVSQYHVSHQLQTVQDKNSPPQDVPPPNSSSLPPSYVGLSAPSDGASNYLQ
DDSKPPTVTTGDTASQPANRSISSTPTAAAAPRGRLPHDRVGILEDRIQADPRGDTDAWL
ELINEHRSRNKLDSAREVYERFFKIFPSAAEQWVAYANMESENNELYRLEQIFNKSLLSI
PNVQLWSVYLDYVRRRNNLTTDTTGQARGIISSAYDFALQNIGVDKDSANIWVDYIQFIR
SGPGNIGGSGWQDQQKMDLLRKAYQRAICVPTQAVNTLWKEYDQFEMGLNKLTGRKFLQE
RSPAYMTARSSFTELQNITRELVRASLPRLPPAPGCEGEEMYNKQVEIWKRWIKWEKDDP
LVLRDEDGGAGYKARVLYVYRQSLMALRFLPEIWFDAADFCFQNEMESEGNDFLKQGIDA
NPESCLLAFKLADRIEVTTESEQDSRKRGAKAREPYDRLLDALYDLISKAKAQEAKDIAF
VEESFSSQAESSRRHVMVVTNEEDEDEGDDAAKAREAAKNSQIEALKKKHAEAIGQLSKT
ISFAWIALMRSMRRIQGKGKPGEMAGSRQIFADARKRGRITSDVYIASALLEHYCYKDPA
ATKIFERGAKLFPEDENFTLEYLKHLIDINDITNARAVFEMSVRRLAANPNNTHKAKPIF
AFMHEHESRYGDMVQILNLEARMRELFPEDPVLKQFLHRFSTPAFDPTAFQPILSPSQTK
PKLASFTATEEMRPCQGSPSTRYPQGSGPAPPTTATHSPKRPYAPEEFDDDASNRPRKFM
RAESPLKGAAGRRLNQQKQQIQQQVVNGGGVGGGGGGGMGGGYGGGAGGGQGNKPPIPIP
LPREIMFLLSIIPGASTYDATRFSPEKMVALLRQLDVPSSVSQLRPPVPPPGGGGVGGMA
GGMNRGQYMGMYRPGS
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatgaggctgaaaaagcatttttccaagcgcaatctttgaatgcagatatc
gcgagttatgaggcagctggggatcaggatggggatagttcagactcagacgattatgat
ccttcaaaaacagttcaaaatcatcaagatcagtattctgcgcagttaacagattcaaaa
ccgagtgctgtttcaaatacttcttccctttcagcttccttgaagcggaggtctatgtcc
caagatttctctgaagccgtgcaaaatagtcatacttttcctccctcacaaatcccctcc
gggtctgaacctggagatcccacccctcttccaccttccaatacctctgctcctgtacaa
gtgtcatcccagtccattgggaattttgttgtcggggaggatagcgacgaggatagaggc
gaggctgaatatgaacctcctgcagcgttaagtcatgttcatggtggtgatggtggtgat
gacgggaatgagggtaatgatgatgataatgtggcctctgacccttctggcagtcgtcag
cattccctttctcaaaatgccaatgaaaatgtttctcaatatcatgtatcacatcaactg
cagactgttcaagacaaaaactctcctcctcaagatgttcctcctcccaatagctcatct
cttcctccttcctatgttggtctttcggcgccaagtgatggtgcctccaattacttgcag
gatgattcaaaaccgccgaccgtgacaacgggcgatactgcctctcaacctgcaaacaga
tctatatcctctactcctacagcagctgcggcaccgcgaggccgtcttcctcatgatcga
gtgggtatcttggaggataggattcaggctgatccgcgcggtgatacggacgcttggttg
gagctaattaacgaacaccgctcccgaaataaacttgatagtgcccgagaggtctatgag
agattcttcaaaatcttcccatcagctgctgagcaatgggtcgcatatgcaaacatggag
tcggaaaataacgaactctatcgattagagcagatttttaataagagtctcttgtccata
cctaatgtccagttatggtccgtatatctcgattatgttcgtcgccgtaataatttaacc
acagatacgaccggccaagctcgaggtatcatttcatctgcctacgacttcgctctgcag
aacatcggagttgataaagactccgcgaacatttgggttgattacatccagttcattcgc
tccggacctgggaatattggtggttcgggttggcaagatcaacagaagatggatcttttg
cgaaaagcttaccagagagccatatgtgttcccacgcaagctgtcaataccctttggaag
gagtacgatcagtttgaaatgggcttgaataagttgactggtcgaaaattcctccaggag
agatccccagcctatatgacggcacggagctcttttacagagttgcagaacattaccaga
gaactcgtccgtgcctcgctacccaggttgcctcccgcgccaggatgtgagggtgaggaa
atgtacaataagcaagtggagatatggaagcgctggatcaaatgggaaaaagatgatccc
ttagtactaagggatgaggatggtggtgctggttataaggctcgagtgctttatgtttac
cgacagtcgctgatggcattgagattcctgcccgagatatggtttgatgctgcagatttc
tgtttccaaaatgaaatggagtctgagggcaatgacttcttaaaacaaggaatagatgcc
aatccagagagttgcttacttgcgtttaaactcgctgatcgaatagaagttaccacggaa
tctgagcaggactctagaaagcgcggtgccaaagctagagagccatatgacagactgctt
gatgccctttacgacttgatatcgaaagcaaaggcccaggaggctaaggatattgcattt
gttgaagagagcttttcttctcaagcagaaagctctcgacggcatgtcatggtcgttact
aatgaggaggatgaggatgagggcgacgatgctgccaaggcaagagaagcggcgaaaaat
agtcagatcgaggctttaaagaagaagcatgcggaggcaattggccagctgtcgaaaacc
atatcatttgcttggattgctctcatgagatcaatgcgccgtattcaagggaagggcaaa
ccaggagaaatggcaggatcacgacagatttttgctgatgcgcgcaaacgcgggcgcata
actagcgatgtctacatcgcgagtgcgttactggagcattactgctataaagatcctgca
gcgacgaagatattcgagcgcggcgcaaaactatttcccgaggatgaaaatttcactctg
gagtatcttaaacatcttatcgacattaatgatatcactaatgcgagagccgtattcgag
atgtccgtcaggagactagcagctaatccaaacaacacacacaaggccaaacccatcttc
gcgttcatgcacgaacatgaatcaagatatggagatatggtccagatcctgaacctcgag
gctcggatgcgagagttattccctgaagaccctgtcctcaaacaattcctccaccgcttt
tctacaccagccttcgaccccactgctttccaaccaatcctctccccttcccagacgaaa
ccaaaactggcctcctttactgctacggaggagatgcgaccatgccagggatccccttct
actcggtatcctcaagggtcaggaccagcaccgccaacaacagcaacccactcccccaaa
cgtccctatgcacccgaagaattcgacgatgacgcatcaaatcgtccgcgtaagttcatg
cgggctgagtcaccactgaagggtgcagccggccggcgactgaatcagcagaaacaacaa
attcagcagcaggtggtgaatggcggcggcgtaggtggaggcgggggaggcggcatgggt
ggtgggtatggcggtggtgctggtggtggtcagggaaacaagccacccatcccaattccg
ctaccgcgggagatcatgtttttgcttagcattatcccgggagcgtctacgtatgatgcc
acgaggttttcgccggagaagatggttgcgttgttgcgccagttggatgttccgtcgtcg
gtgagtcaacttcgaccgcccgttccgccgcctgggggcggtggtgttggtgggatggcg
gggggtatgaatcgtggacagtatatgggtatgtaccgtccggggtcatag
DBGET
integrated database retrieval system
