Blastomyces gilchristii: BDBG_03189
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Entry
BDBG_03189 CDS
T06540
Name
(RefSeq) polyadenylate-binding protein, cytoplasmic and nuclear
KO
K13126
polyadenylate-binding protein
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03015
mRNA surveillance pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BDBG_03189
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_03189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_03189
03041 Spliceosome [BR:
bgh03041
]
BDBG_03189
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
BDBG_03189
mRNA cycle factors
Stress granule specific factors
BDBG_03189
Spliceosome [BR:
bgh03041
]
Complex C
Other components
Complex C specific factors
BDBG_03189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_7
RRM_MARF1
RRM_occluded
YflT
PABC_AtC3H46
RRG7
RRM_YTH1
ERK-JNK_inhib
Motif
Other DBs
NCBI-GeneID:
8505719
NCBI-ProteinID:
XP_031577585
UniProt:
A0A179UIV7
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MSAAEVSSAPVPETNPVESSTNGTTVNTNVANDAAGDGSETPNSAAPSTTQPHSASLYVG
ELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTL
IKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFG
NSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYV
KNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDK
EFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDIDDEKLRDLF
IGFGNITSARVMRDTIADAGSESEKEKEISNKENVKEEAKKESAEEESSDKSDKAEKSDS
KKTLEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEAS
IQARNTIRQQQVAAAAGMSQPPAVYYPPGQQGFIPTNAGQRGGMAFGQQPGMVLPGMPGG
RPGQFAGGFPGQQGGRGINPNQQLPPNAFGMGAQGLPMGALQGPGGLPNGLSYPQAIAQV
QASFGRGGGGRGQAPGMQGMPPSMGNAPGMRAGGQAFTQGRGMPPQQGVARPGQAGRGAG
PAQGMPPRDESAGGPTLNLQALSAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEM
DNAELLSLVDDEAALRAKVDEAINVYDEYMKSKGGEGEAADASKHPKEAVKDSKTEETKS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctgaagtatcatccgctcccgtcccagagaccaaccccgtggaatcgtcg
accaatggcaccaccgtcaacacaaacgttgcaaacgacgctgccggagatggcagcgaa
acgcccaactccgctgctcccagcaccacccagccacattctgcctccctctacgtcgga
gaattagactcttccgtcaccgaagctatgcttttcgaactcttctcctccatcggccaa
gtcgcctccattcgtgtgtgccgtgacgccgtcaccagacgttctctgggctatgcctat
gtcaactacaacaacaccgccgatggtgaacgtgctctcgaagacctcaactacacgctg
atcaagggaaaaccctgccggattatgtggtcccagcgagatcctgccctgcgcaagacc
ggccagggtaatgtcttcatcaagaacttggatactgctattgacaacaaggctcttcac
gacaccttcgccgctttcggtaacattctcagctgcaaagtcgcccaggacgagttcggt
aactccaagggctatggcttcgtccactacgaaaccgctgaagctgccaccaacgccatc
aaacacgttaacggtatgctgttgaacgagaagaaggtcttcgtcggccaccacatcgcc
aagaaggatcgccagagcaaattcgaggagatgaaagccaacttcaccaacgtatacgtc
aagaacttggataccaaggtcaccaatgaagagttccgggagctgtttgggaaatacggc
gatatcacctccgcatcaattacccacgacagcgagactggaaagagcagagggttcggt
ttcgtgaactttgtcaagcatgagagcgctgccgccgctgtcgaagagctaaatgacaag
gaattcaagggccaaaaactctacgttggccgcgcgcagaagaagcacgagcgggaggag
gagctgcgcaagcagcacgaggccgctcgtgtcgaaaaagcatccaaataccagggtgtt
aatctctacgtcaagaacttgaccgacgacatcgatgatgagaaactccgggacctcttt
attggcttcggaaacattacatctgctagagttatgcgtgacactattgcggatgccggc
tctgaatctgagaaggaaaaggagatctccaacaaggagaacgtgaaggaagaggctaag
aaggagtccgctgaagaagaatcctccgacaagagcgataaagctgagaaatccgatagc
aagaagactctcgagaagaagcttggaaagagcaagggctttggtttcgtctgcttcagc
aatcctgatgaagcgtccaaggctgtcacggagatgaaccagcgcatggtcaatggcaaa
cctctatacgttgcacttgctcaacggaaggatgtgcgcaaaagccagctcgaggcaagc
attcaagctcgtaataccatccgacaacagcaggttgctgccgccgcaggaatgtcccag
ccacccgctgtctactatccaccaggccagcaaggattcattcctaccaacgctggacaa
cgcggtggtatggcctttggtcagcaacctggaatggtccttcccggtatgccgggcggt
cgccctggtcaattcgctggcggattcccaggacagcaaggcggacgcggtattaacccc
aaccaacaactgcccccaaatgcctttggcatgggtgcccagggactccccatgggtgcg
ctccagggccctggcggactaccaaacggtctcagctaccctcaagctattgctcaagtc
caagcgtcattcggacggggcggcggcggtcgtggccaggctcctggcatgcagggtatg
cctccaagtatgggtaatgcaccaggcatgcgcgctggcggtcaagctttcacacagggt
cgtggcatgccaccccaacaaggggttgcccgtcccggacaagctggccgtggagctggc
ccagcccaaggaatgccaccccgtgatgagtctgccggcggtccaacccttaacctccag
gccttgagtgccgcccctcctgcccaacaaaaacaaatgcttggtgaagccatctacccc
aagatccaagcccaacaacctgagctggctggcaagatcactggtatgcttttggaaatg
gacaatgctgaactacttagtttggtcgacgatgaggctgcactccgcgccaaggtcgat
gaggctatcaatgtttatgacgaatatatgaagagcaaaggtggtgaaggtgaagctgcg
gacgcatccaaacacccaaaggaagcggtgaaagatagcaagacagaagagacgaagtcg
taa
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