Blastomyces gilchristii: BDBG_03907
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Entry
BDBG_03907 CDS
T06540
Name
(RefSeq) ATP dependent RNA helicase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
bgh
Blastomyces gilchristii
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgh03041
]
BDBG_03907
Enzymes [BR:
bgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BDBG_03907
Spliceosome [BR:
bgh03041
]
Complex C
Other components
Complex C specific factors
BDBG_03907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
Cas3-like_C_2
Helicase_RecD
AAA_19
AAA_30
cobW
Herpes_ori_bp
T2SSE
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
8509858
NCBI-ProteinID:
XP_002625848
UniProt:
A0A179UJ41
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MASDFDLSASFIPSLYKPAALLPIARHRQSLLYLIETYPVTVVVGQTGSGKTTQLPQFLD
QAGWCSDGKIIAVTQPRRVAATTVATRVAEEMRCKVGEDVGYSIRFEDVTSSSTRIKFLT
DGLLLREALVDPLLSRYSVIMVDEAHERSISTDVLLGVLKKIRKPRPELRIVISSATLQA
EEFLRFFAGDEFNPESEDELGGSIGRVITLEGRMYPVDCLFLETPVEDYVERAIKTVFDI
HTREPDGDILVFLTGREEIDTVIQQISERANSLHAKAPGLLPLPLYAGLTTEQQLYVFEP
APEKTRKVIVSTNIAEASVTIDGIVYVIDCGFAKLRAYNPNTGIETLTPTPISKASATQR
AGRAGRTKPGKCFRLYTEQSYQSLPDVTVPEIQRSNLAPVILQLKALGIDNIVRFGFLTP
PPSELVVRGFELLYSLGAVDDYAKLTRSLGIQMAELAVEPMMAKVLLGAPSFGCLSEILS
IAAMTSLQGAVWFEKSDEKKAVESTRRKFAVDEGDHLTYLNVYQAFVTKGKKDSKWCRDN
YLNYRSMLKAVSIRAQLKRYLERFGIQVDESLSSSSPAPPEQIQRCLTTGYFAHAAKMQP
DGSFKPISGDITLHAHPSSLMFNRKADWVIFHEILETGQKTFIRDITKIEKSWLLEYAPE
YYQVKK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgactttgatctctcggcttcgttcatcccgtcgctgtataaacctgccgcg
ctactacccatagctcgccaccggcaatctcttctgtacctcatagaaacatatcctgtg
actgttgtcgtgggccaaacaggtagtggaaagactacccagttgccccaatttctcgac
caggcaggatggtgttcagacgggaagatcattgctgtcactcagcctcggcgagtggcg
gcgaccacagtagcaactagggtggcagaggaaatgcgatgtaaggtgggcgaagatgta
ggctattcgatacgttttgaagatgtaacttcttcctcaacgcggatcaagttcctgacc
gacggtttactattacgagaagcgttggtcgaccctttattgtcccggtattctgttatc
atggtcgacgaggcccatgaacgctctataagcaccgatgtcttgctcggtgtgcttaag
aaaattagaaaaccgcgacctgaattacgcatcgtgattagcagtgctacgttacaggca
gaagaatttctgcgcttctttgctggggatgaattcaaccctgaaagtgaagatgagctg
ggtggctctattggcagagttatcacattagaagggaggatgtatcctgtggactgccta
tttcttgaaacaccagtcgaagattatgtggagagagcaatcaaaactgtatttgatatc
cacaccagggaaccggacggggacatcttggtgttccttacgggaagggaggaaatcgat
actgtaattcagcaaatctctgaacgcgcaaattcgttacatgccaaagcccccggtctg
cttccattacccctttatgctggactcactaccgaacagcagctctacgtctttgaacct
gcccctgaaaagactcgaaaagtcattgtatccaccaatatcgcagaagcttccgtcaca
attgacggaattgtatatgttattgattgcggatttgcaaagcttcgtgcatacaatcca
aatacgggaatagagaccttgacgccaacgcctatctccaaagcatctgcgacccagcga
gcgggacgtgctggacggaccaaaccaggaaaatgcttccgtctttacactgagcagtct
taccaatcacttccggatgtcacggttccggaaatccagcggtccaatcttgcacctgtt
attctgcagctcaaggctctgggtattgacaatatcgttcgctttggctttcttacgccc
cctccatctgagctcgttgttcgcggctttgaattgctctattccctcggggcagttgat
gactatgcaaaacttacgcggtcacttgggattcaaatggctgagcttgcggtggagcct
atgatggccaaggttctgcttggtgcgccatcctttggctgtctgagtgaaattctgtca
attgctgcgatgacgagtctgcaaggagcggtctggtttgagaaaagtgacgaaaagaag
gcagtcgagagcactcgtcgaaagtttgccgtggatgaaggagaccacttaacctactta
aatgtttaccaagcgtttgtcaccaagggaaaaaaggactcaaagtggtgtcgggataac
tatctaaactacaggtccatgctaaaggctgttagcattcgtgcgcaactcaagcgatat
cttgagcgctttggcattcaggttgatgaaagtctctcttcatccagccccgcgccacca
gagcaaatccagcgctgccttacaaccggatattttgcacacgcggcgaagatgcagcca
gatggtagcttcaagcccatcagtggtgacatcacgctacatgcccaccctagttcgttg
atgtttaaccgcaaagctgactgggttatcttccatgaaatcctggaaacagggcaaaag
acgttcattcgagatattaccaaaatcgagaagtcttggctgctcgagtatgcaccggaa
tactatcaagttaaaaagtga
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