Blastomyces gilchristii: BDBG_04692
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Entry
BDBG_04692 CDS
T06540
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03020
RNA polymerase
bgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDBG_04692
09124 Replication and repair
03420 Nucleotide excision repair
BDBG_04692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgh03021
]
BDBG_04692
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_04692
Enzymes [BR:
bgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDBG_04692
Transcription machinery [BR:
bgh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BDBG_04692
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BDBG_04692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
8504483
NCBI-ProteinID:
XP_002624828
UniProt:
A0A179UMD8
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MEDYEEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEE
QGQVTLDQTLAPSEDEIDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLT
YASPLYLGITKRVTEGRERLIAERDDAEQGEEDHDEERRSRGTYLHWEPKPLNEDEPEEE
NVFIGRMPIMLKSKYCILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIV
QVFKKAPPSPTPYVAEIRSAIEKGSRILSQLSIKLFGKGDASKGGFGPTIRSTLPYIKTD
IPIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGS
SPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDR
DHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLYLNIGVKASTLSGGLK
YALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTH
WGLVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVLEEFEPQVSPNAT
KVFVNGVWVGVHRDPSHLVNTVQSLRRRNMISHEVSLVRDIRDREFKIFTDAGRVCRPLF
VVENDPKSENCGSLVLSKEHIHKLEADKELPPDLDPEERRERYFGWDGLVKSGVVEYVDA
EEEETIMIVMTPEDLETSKQLQAGFSLPEEDNNDPNRRVRSTLSQKTHTWTHCEIHPSMI
LGICASIIPFPDHNQSPRNTYQAAMGKQAMGVFLTNFDQRMETMANILYYPQKPLATTRS
MEFLKFRELPAGQNSIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYTDSEKMVGM
TVVERFEKPMRSDTLRMKHGTYDKVDDDGIVAPGVRVSGEDIIIGKTAPLAPEAEELGQR
TKQHTKLDVSTPLRSTESGIVDQVLVSTSNDDLKFVKVRMRTTKIPQIGDKFASRHGQKG
TIGITYRQEDMPFTREGIVPDLIINPHAIPSRMTIAHLIECQLSKVSSLRGFEGDATPFT
DVTVDSISSLLREHGYQSRGFEVMYNGYTGRKLVAQVFLGPTYYQRLRHMVDDKIHARAR
GPTQILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLFDVSDPFRVHICDICGL
MTPIAKLKKSDFECRACKNKNKISQVHIPYAAKLLFQELMSMNIAARLFTKRSGVSLR
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggaggattacgaagaagaatatggagaagatgcctactatgaccaagatgaagggatt
acatcagaagactgctggacggtgatttcgtccttcttcgaatcgaagggtctcgtgtcg
cagcagctcgattctttcgatgagtttatctcgacgactatgcaggagctggtggaggag
caaggacaggtaacactcgatcaaactctggctccttctgaagatgagatagacccggta
gttttgcgacgctatgagttaaaatttggcaccgtgatgcttgcgcgaccgtcgatgact
gaaggcgatggcgctaccagtattatgttgccacaggaagcacgacttcgaaacctcaca
tatgccagtcctctctaccttgggattacgaagagagtcacggaaggacgagagcgactc
attgccgaacgtgatgatgctgagcaaggggaagaggatcacgatgaggagaggcggagt
aggggaacatatttgcactgggagccgaagcctttgaatgaggatgagccagaagaagag
aatgtttttatcggaagaatgccgattatgctgaagtcgaaatactgcatcctcaaggat
ctaaatgaacagtcgctctacaactggaacgaatgcccttacgattccggcggatacttc
attatcaacggcagtgaaaaggttcttatcgctcaggagcgcagtgcaggcaatattgtt
caagtttttaagaaagctcctccaagtccaacaccatacgtcgcggaaatccgaagcgcg
attgagaaaggatccagaatactgtcccagctgtcaataaagcttttcggtaaaggtgac
gcctccaagggtggctttggcccaacgatccgatctacgctaccttacatcaaaaccgac
atccccatagttgttgttttccgggctctaggtgtggtgtctgacgaagatatcctcaac
catatttgttatgaccggaatgatacgccaatgttggaaatgcttaagccatgtatcgag
gaagggttcgttatccaggatcgtgaggtagctcttgacttcatcagtaagcgaggctct
tcccccacaagcatgaatcatgagaagcgggttaggtacgcgagggatatcatccagaag
gaattccttccgcatatctctcagagtgaaggtagcgagacgcggaaagcatttttcttg
ggatatatggtgcacaggcttctccagtgtgccctaggtcgtcgcgatgttgatgaccgc
gatcattttggaaagaaaagactggatttagctggcccgctacttgccaaccttttcaga
attctgttcatgagagttaccaaagatctttacaaatacgtccagagatgcgtggaaact
aatcggcaactatacctgaacattggcgtgaaggcaagcaccttatctgggggtcttaag
tatgctcttgctacaggtaactggggcgagcagaaaaaggcggctagttccaaggctggt
gtttcgcaagtgctaaatcgctacacatatgcctcgaccctttcccatcttcgccgtacc
aacacacccattggacgtgatggcaagattgcgaagcctcgacaacttcacaatactcac
tggggacttgtctgtccggctgaaacgccggaaggacaagcttgtggtcttgttaagaat
ctggctttgatgtgttatattactgttggtacaccaagcgaaccgattattgatttcatg
atacaacgcaacatggaagttctagaggagtttgagcctcaggtgtcgccgaatgcgacc
aaagtcttcgtcaacggtgtatgggtgggagttcatagagatccttctcatcttgtaaac
acagtccaatcgttgagacgacgtaacatgatttcccatgaagtcagtttggtgcgagac
attcgagaccgggaatttaagatcttcaccgatgctggacgagtctgccggcctctcttt
gtggttgagaatgacccgaagagtgaaaattgtggctctcttgtgctatccaaagagcac
atccacaaactcgaagcggacaaagagcttccaccagatttggatcccgaagagcgcaga
gaacggtactttggctgggacggccttgttaaatccggtgttgttgaatatgtggatgcg
gaggaggaagaaaccattatgattgtcatgacacccgaggatttggaaacttcaaaacaa
ttacaagctggatttagtcttccggaggaagataataatgaccccaatcgacgagtccga
tcgactcttagccaaaaaacgcatacctggacccattgtgagatccaccccagtatgatt
ctaggtatctgtgccagtatcattccgttccccgaccacaaccaatccccacgtaacaca
tatcaagctgctatgggaaaacaagctatgggtgttttcctcacaaacttcgaccagcgg
atggaaacgatggcaaacattttatactatccacaaaaaccacttgctacaacgcggtct
atggagttcctgaaattccgcgagcttcctgctgggcagaattcaattgtagcaattgct
tgctactctgggtacaaccaggaggattctgtgatcatgaaccagagtagtatcgatcgt
ggtcttttccggagtctgttctaccgaacctacacagactccgaaaagatggtcggtatg
actgtcgtggaaagatttgaaaaacccatgagatcagacacccttcgcatgaagcatggt
acttatgataaggtcgatgatgacggtattgttgctcctggtgttcgtgtttcgggtgag
gatattatcatcgggaaaactgctcccttggcacctgaggcagaagagctaggccagagg
acgaaacaacatacaaaactcgatgtttctactcctctgcgtagtaccgagagcggtatc
gtcgaccaagttttggtctctacgagcaatgatgatctgaaattcgtcaaagttcggatg
agaactacaaagattcctcaaattggagacaagttcgcttctcgccacggccaaaagggt
accattggtattacatatcgacaagaagacatgcccttcactcgtgaaggcattgttccg
gatctgattatcaatccccacgccattccttctcgaatgaccattgcccatttgatcgag
tgtcagcttagtaaagtttcgtcactccgtggatttgaaggtgatgcaacgccatttaca
gacgtgacagtagattccatctccagcttgctccgtgaacacggctatcagtcccgcggc
tttgaggtgatgtacaatggatatacgggccgaaagttggtcgcccaagtcttcctgggt
ccaacttactaccaacgcctacgacatatggtcgacgataagatccatgcccgcgcacgt
ggcccaacccagattcttacacgccagcctgtggaaggtcgtgcgagagacggtggcctt
cgattcggagagatggaacgcgattgtatgattgctcatggcgccagcgcattcctaaag
gaaagattatttgacgtgtctgatccattccgtgtccacatctgcgatatctgcgggctg
atgacaccaattgcgaaactcaaaaagagcgatttcgaatgtcgggcttgcaagaacaag
aacaagatttcgcaggtccacatcccgtatgctgccaagcttcttttccaagagctaatg
tcgatgaatatcgccgcacgattgtttacgaagcggtccggggtgtctttgcgataa
DBGET
integrated database retrieval system
