Blastomyces gilchristii: BDBG_04746
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Entry
BDBG_04746 CDS
T06540
Name
(RefSeq) exosome complex endonuclease 1/ribosomal RNA processing protein
KO
K11600
exosome complex component RRP41
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_04746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_04746
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BDBG_04746
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
BDBG_04746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8504425
NCBI-ProteinID:
XP_002624882
UniProt:
A0A179URZ7
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MPLDTSTTYRLTRLRLDGRRWNELRLMQAQISTNPASSGSSYLSMGNTVVICMVHGPAEG
RRSEATGPAREGAVVSVAVNVAGFSGVDRKKRGATGGGGDRQASTDLATALRDAFQPHLH
THLYPHSTISLHVSVLSSDGSLFAACINACTLALVDAGIPMPGLLCACTVGMSGRASTPA
APELARVGGINESLDPLLDMSMPEEQELPFMTVANTNPAPTGDDSMDDEEGEENQMLSVV
QMESGVHISYLETMFAVGLDGCKQVREILNGVLKAAGRKVLEGEGEIFSSMEQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgacacatcaacaacatatcgcctcaccaggcttcggctagatggcaggcgc
tggaatgagctccgtttaatgcaagcgcagatctccacgaaccccgcgagctctggatca
tcatatctctcaatgggtaatacggtagttatttgtatggtccatgggccggcggaaggc
cgacgatccgaagcaacaggccctgctcgtgaaggtgccgtagtatcagttgctgtcaat
gttgcagggttttctggggttgacaggaagaagaggggtgcgactggcggtggaggtgac
agacaagcatctacagatctagctaccgcgctccgtgacgccttccaaccacatctccac
acccacctatatccgcatagcacaatatcccttcacgtttccgtcctatcatccgacggc
tctctctttgcggcatgcatcaacgcctgcaccctagcactggtggatgccgggatacca
atgcccggccttctctgcgcgtgcaccgtcggaatgagcgggagggcatccaccccggcg
gcgcctgaactggcccgagtgggcggaattaacgaaagtttggatccgcttctcgacatg
tcgatgcccgaagaacaagaactcccattcatgactgtcgcgaatacgaacccggcgccc
acgggggacgattcgatggatgatgaggagggggaggagaatcagatgctgtctgttgtc
cagatggagtcgggggtgcatatttcatatctggagactatgtttgcggtggggctggat
gggtgcaagcaggtcagggagatacttaatggcgttttgaaagctgcggggcggaaagtg
ctggaaggggagggtgaaatattttctagtatggaacaatga
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