Blastomyces gilchristii: BDBG_05461
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Entry
BDBG_05461 CDS
T06540
Name
(RefSeq) polyadenylation factor subunit CstF64
KO
K14407
cleavage stimulation factor subunit 2
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BDBG_05461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_05461
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
BDBG_05461
U7-dependent histone pre-mRNA processing factors
BDBG_05461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
Spo7_2_N
RRM_occluded
Ssol_1539-like_2nd
RRM_11
DUF8400
Motif
Other DBs
NCBI-GeneID:
8503957
NCBI-ProteinID:
XP_002623953
UniProt:
A0A179UR88
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MPPERFGKSVFLGNIPYNLTEEQVKDILSSAGTVTKFRLMINPETGKPKGYGFADFADAD
AAASAVRNLNDYEIMGRKIRVDWPHNNEKDSVPPDYPQQSQMGMMQGMQGQDQSQAPVLP
PLPPGTELPPNLTCPNAISQTLASLPAPQLLDVITQMKSLVMADPARATELLRQAPHLAY
AIFQALLLMNLVDYSVLGSVVEQASQPQQPPPQATPQMPQQFQPYPPIPGQISTPPVQHT
PFAPPQMPPQSQPLPQQQPAPSQIPSHDELLQQVLSMPQSAIDALPPTERSQIMLLRQQL
MQGGMR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagagcgcttcggtaaaagcgttttccttgggaatatcccctacaatcttacg
gaagagcaggtgaaagacattctcagctccgcgggcactgttacgaaattccggttgatg
ataaaccccgaaaccggaaaaccaaagggatatggatttgccgactttgcggacgcagac
gctgctgcttctgccgtacgaaatctgaatgattatgaaattatgggtcgcaagataaga
gtggattggccacataacaatgagaaagactccgtaccgcctgactacccccaacaatct
cagatgggtatgatgcaggggatgcagggacaagaccagtcgcaggcacctgtactgcca
ccattacctccaggaacagaacttccgccaaacctcacttgccctaacgcgatatcacaa
actctcgcttccctccccgctcctcaacttctcgacgttattacgcagatgaagtcactg
gtgatggcagacccagctcgcgcaacggagctattgagacaagccccccatcttgcctat
gccatattccaagcgctgttactcatgaatcttgttgattacagcgtccttggctctgtc
gttgagcaagcgtcacagcctcaacagcctccgccacaagcgacacctcagatgcctcaa
cagttccaaccatatccaccgatccctggtcaaatatctacgccccctgtacaacatact
cctttcgcgccacctcaaatgcctcctcaatctcaacccctaccacagcaacagcccgcc
ccatcacagatccctagccatgacgagctgctacaacaggtattgagcatgccacaatct
gcgatagatgcgctgccaccaacggagcgtagccagataatgttactgaggcagcagtta
atgcaaggagggatgcgatag
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