Blastomyces gilchristii: BDBG_05966
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Entry
BDBG_05966 CDS
T06540
Name
(RefSeq) pre-mRNA splicing factor
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BDBG_05966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgh03041
]
BDBG_05966
Spliceosome [BR:
bgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
BDBG_05966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
8503585
NCBI-ProteinID:
XP_002623792
UniProt:
A0A179UQD5
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MVTLADELLNDFEESGSEDEGKVANTLFPDSVGEPDLDTSAKARGEGMELDGDEEEGNDD
EADVDVAIDPTGKLAKEMGEAEATKAKVEKMRLGAVSDVRSVASLMKTLQPILDKVSYYQ
SLPPDKRTTAIGSIEDNPEYHLLTEANSLSTSIDNEMILVHKFIRDHYSTRFPELETLIT
NPLDYAKTVAILQNGPLDDIKSLSTSTDNLVGATLRSVLDGPSLMIVAVEGTTTRGRELS
QTELETVLDACKMMLSLDRAKGILTDYVQSRMNVFAPNLTVLIGSLTAAQLLNYAGGLTG
LAKTPSCNIPPLGSKKQTGTGFATNVGVRHQGFLYHSPIIQEIPNDLKRQAMRIVSAKVV
LAARVDRVHSSPDGSTGEELKQACLDRLEKLTEPPPNKGPRALPAPDDKPSRKRGGRRAR
KAKEATAMTEIRKAQNRMAFGKEEKEIGYGTGEGTKGLGMLGQEDHGRIRASQIDQRTKA
KLSKSNKGWGAATPIGGTASSLRGFGQGAGNATVLRAQGLRTAGVGPSLGAGAGIASSIA
FTPVQGLELVDPKAQAELNRKRKAEEDRWFKSGTFTQVGNQNNGGNSSGGFKVPELPRKR
VDTGDTKMPPPPPPTNK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgactctagcagacgaactattgaacgattttgaggagtctggctctgaggatgag
ggcaaggtggccaacactctgttccccgatagtgttggggaacccgatttggatacttct
gcgaaagctcgaggcgaagggatggagctggacggagacgaagaggaaggtaatgatgat
gaggcggatgtggatgttgccatagacccaactgggaaattagccaaagaaatgggggaa
gctgaggcgaccaaggcgaaggtcgagaaaatgcgactcggagccgtgagcgatgtacga
agcgtggcaagtttaatgaagacactccaaccgattctagataaagtatcctattaccaa
tcgcttccacccgacaaaagaacgacggctatcggttcgatcgaggataatccagagtat
catctacttactgaggccaactccctttcaacttcgatcgataatgagatgattctagtc
cacaagttcattcgggatcactactctactagatttccagagctagaaactctcatcaca
aacccgttagactacgcgaagaccgtggcaattttacaaaatggcccgctcgacgatatc
aaatccttgtcaacctcaacggataatctagttggcgcgactctgagatccgttctcgat
ggaccttccttgatgatcgtcgcagtggagggaactacaacccgtggccgagagttgtcc
caaacggaactcgagactgttttagacgcatgcaaaatgatgctatcgcttgatagagct
aaggggatcctaaccgactatgttcaatcgcgaatgaatgtctttgctccgaatctaacg
gtcctcattggatccctcactgctgcacagcttctaaattatgctggaggtcttacaggg
cttgcgaagacgccttcctgtaatattccgcctttgggatcaaaaaaacaaacagggact
ggctttgcaactaatgttggggtgagacaccaagggtttctgtaccactcaccgatcatc
caggaaatcccgaacgacctgaagcggcaagcgatgcgtatcgtatccgccaaagtggtt
ttggccgctagagtcgaccgagtgcatagtagccccgatggatccacaggagaagaactg
aagcaagcgtgtttggatcggcttgagaaattaaccgagccccctccaaacaagggtcca
cgtgccctacctgcacctgatgataaaccgtctagaaaacgtggcggacgaagagcacga
aaggcgaaggaagcgaccgcgatgacagagatccgcaaagcacagaatcgtatggcgttt
gggaaagaagaaaaggaaatcggatatggtactggagagggtacgaaaggcttgggtatg
cttggtcaggaggatcatggccggatacgtgcaagccaaatcgaccaacgaaccaaggct
aagctcagtaaatccaataagggatggggggctgcgactcctatcgggggaactgcttct
tcactgcgaggctttggacaaggcgccggaaatgcaacagtattacgagcacagggactc
cgtactgctggcgttgggccgtctcttggtgccggtgccggaatagccagctcgatcgcc
tttaccccagtccaaggtttagagctggtcgatcctaaggctcaagctgagcttaatagg
aagcggaaggcggaggaggatagatggtttaagagcgggacatttacacaagttgggaac
caaaacaatggaggtaactctagtggaggatttaaagttccggaattgccgcggaaacgg
gttgatactggtgatactaagatgccgccgccgccccctccgacaaacaaataa
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