KEGG   Blastomyces gilchristii: BDBG_06394
Entry
BDBG_06394        CDS       T06540                                 
Name
(RefSeq) small nuclear ribonucleoprotein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03018  RNA degradation
bgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BDBG_06394
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDBG_06394
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgh03019]
    BDBG_06394
   03041 Spliceosome [BR:bgh03041]
    BDBG_06394
Messenger RNA biogenesis [BR:bgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BDBG_06394
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     BDBG_06394
Spliceosome [BR:bgh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    BDBG_06394
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 8503480
NCBI-ProteinID: XP_002623546
UniProt: A0A179UU58
LinkDB
Position
Unknown
AA seq 160 aa
MSERSSFRGGPRGGGGGRGGGIGGYGYRSHRGGGGGASYQQQQQQSGGVQGGQGWQQGQQ
QQQQQEKPKKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDE
GNQTTRSLGLIVARGTLLVLISPVDGSEEIANPFLQAEDE
NT seq 483 nt   +upstreamnt  +downstreamnt
atgtccgaacgcagctctttccggggtggtccccggggtggtggtggtggacgcggcgga
ggtataggcggttacggctaccgtagccatcgaggtggcggtggcggtgcatcatatcaa
cagcagcagcagcagtctggcggagttcagggcgggcaaggctggcagcagggtcagcag
cagcagcagcagcaggagaagccgaagaaggagaatattttggatctaacgaagtatatg
gagaaggaggtttgtgtcaagtttaatgggggtagggaagtaaccggcactctcaagggc
tatgatcaactcatgaacctcgtcctcgatgatgtaaaagaaactatgcgcgacgacgag
ggtaaccaaacaacccgctccctcggcctcatcgtcgcccgcggcacattgcttgtgctc
atctcgcccgttgatggcagcgaggagattgccaatccgttcttgcaggcggaagatgag
tga

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