Blastomyces gilchristii: BDBG_06899 Help Entry BDBG_06899        CDS       T06540                                  Name (RefSeq) tRNA-splicing endonuclease   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism bgh  Blastomyces gilchristii Brite KEGG Orthology (KO) [BR:bgh00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bgh03021]     BDBG_06899 Enzymes [BR:bgh01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      BDBG_06899     5.6.2.5  RNA 5'-3' helicase      BDBG_06899 Transcription machinery [BR:bgh03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      BDBG_06899 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_30 Viral_helicase1 AAA_19 zf-CCHC DEAD nSTAND3 ResIII T2SSE Motif Other DBs NCBI-GeneID:  8502900 NCBI-ProteinID:  XP_031579825 UniProt:  A0A179UW98 LinkDB All DBs Position Unknown AA seq 2179 aa AA seqDB search MAELMDVLEELKALPEQLHMLCPRQNDDDMGQYNDEHVQSLDSTSPDVKPNVENLSRISD AALRRQKFLSCMRLLAFSGDEVEIQQEWIWRRIEHDLEKCELCIKEYYKGKVWLMDMLGE SYDEFEVEKFGKIIDERDITRIVKNLDRATATLKTAAPQQRSLSILDRAALLSIFEAMSS KAMLNEDEILRAHFDEPFTLVQSNRTLKMPEYIPATTRFLFDANEHRQRWAFNSWGRMKA PPTTPEFDWAIKEPLLAALRQASCQPVQPELVQRLWAGIHTIVKRLDKEQITHNLRALEI DPCRLSVDHLAVPTPGLRSLLNTIQIFLEKAPSDFWDAMQTISPQAIIEQIFYNPQFDEF LLEPRDDDAFERPSPLSDMLSWIEPFMASLKGAHQPQACRVLIFQLLTRLQESRFPAISR YTCFRIGLSTLVSTLRTFTDNESTRGSVARVVLSDTLEVTSDNINHFMEPPDFQIEGNKK VISGLCVDVIRNALALECQSLKSDYEVILRQKPMAHGVSTYSAKIWDAVVQHLDEDNLGL SNAALMGILPLVGLEKFSTKGENSKEKTHFNVIYGHLTHLACQILERLADFKPEHLDHLF KSHDTNGSLISALFSADLNTYQAAVDLIKAISGQSGRKEAISHLLQSFCATTMYGFSFSF RRISNMRTFASAPRMLKTGTDIIDVLCDSETGILRTRKLVDRVEAVSLQRLWEYQWQALT TIFQQTETWHLMGNDRMVMLEFCRDTIQFADLLFNQFTIFASSISEFDPSESKSARENLV KAPAATMGSMVKWLRLKDDYLATTLVGLVAKLLRRMGELDVTLAPDTLKYIEDVARTSSI KTIITAQEKAELVRALESYYKKPFVTVPPAAVPKKKQSTITSYAKPIDLTGISSPSRISG SDEDEFDDEIPDEVLMQLSGSVELNKARIAAQKRPEKPAIPSKSVPRSIKPVTNVLSFRE KREREKEEKKRRDMAELARLKKKMIPSQTANQGSGLQGITVNIDEHGPVESMMVSGSDSD DDSEEDDEGDVLGRKAMSKPDAVKAYEESRKKLLSQRGPVKKTKIVRSAKDMRARLSPDL SLLHRTLLSWEFFANGDLPPNSGRTDYSLVSNTFSDAADYQRTFEPLLILEAWQSFQSAK EEGGFKAFEIKVSNRMSVDAFVEVTTFMQPAEAKDLGLGESDLVLLSKASNPTSNEKAPH CLARIFRSSKKKGMMEISYRINPSNPLVNSILPGTSIFGVRVTSLTPVEREYGALMALKY YDLSEEIIRAKPSPILNYSPESLKPIIDTYNVNPAQAKAVRSAMDNDAFTLIQGPPGSGK TKTIVALVGAILTPVFAEQKIARPGSSVNLKPATRTTNSKKLLVCAPSNAAVDELVMRFK EGVVTSSGQKQNISVVRLGRSDAINSNVIDVTLDELVNAKLGQNGRKNGNEKDLQTYYSE HKEACTQFNEVRDRLDQCRAKGQGVPSELEREFDLLKRKKAQLSQAIDNARDSNQAAARN ADLARKKVQQEIIDGAHVICATLSGSGHEMFQSLSIEFETVVIDEAAQSIELSALIPLKY GCSKCVLVGDPKQLPPTVLSKVASRFQYEQSLFVRMQANHPKDVHLLDTQYRMHPEISRF PSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVA MKLYERLITDYRTYDFTGRIGIITPYKGQLREMKNQFANKYGNSIFTKVEFNTTDAFQGR ECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQ SRNLYTQGDVLHLLQKPQISLDKELGDVEMIDAPSAKSSTPSRTGSVTPGWNGSSRPSSA LSIGRLSSIPDNHPTSSRDTPGHSPKLVPSTGPEGPSGGKFGLNELAMCGFCGSYEHMTT NCDNTEAKLASRGACWRCGDVSHSKRDCEAERCFQCGGIGHLARACTSIVVLSKREKDRI AREEHQHAQVLKANLERQRKRQLGDHDPKVPVIQVPPKIASNVPSSAVLPNQKRDLPNTD QRNSGKRKRMETEPPNPRTNVKVRKPNAQFNAQFGAPMNAPKGPRGKKIDPHIVTPPTSD LVIPSKSGQRHQPIDSKTQQPPRPRPGTGPEKQTANTAQLPPSTSRPNKPPPRPNAEGRG PPPMRKKKPTSIFIQPKRR NT seq 6540 nt NT seq  +upstreamnt  +downstreamnt atggcggaactgatggatgttctcgaggaactgaaagccctcccggagcagctccatatg ctctgtccccgccaaaacgacgatgatatgggacagtataatgatgaacatgtccaatca cttgactccaccagtccagacgtgaaacccaatgtcgaaaacctcagccgtatatccgat gccgccttgcgaaggcaaaaattcctatcatgcatgcgccttcttgcgttcagcggtgat gaagtcgaaatccaacaggagtggatatggagacggatcgagcatgacctggaaaaatgc gagctgtgcatcaaggaatattataagggaaaggtgtggctaatggatatgctgggggag agctacgatgagtttgaggtcgaaaagtttggcaaaatcatcgatgaacgggatatcacg cggattgtgaagaatttggatcgggcaacagcgacattgaagactgctgcacctcaacag cggagtctttcgatcttggaccgtgcggccttgttgtcgattttcgaagccatgagttca aaggccatgttgaatgaggacgaaatactccgcgcccattttgatgagccgtttaccttg gtgcagagcaatcggacgttgaagatgccagaatatatacctgcgactactcgatttctt tttgacgcaaatgaacaccggcaacgttgggcttttaattcatggggaagaatgaaggcg ccgcctaccacaccggagttcgactgggccatcaaggaaccgcttcttgcagctcttcgt caagcatcctgccaacctgttcagccggagctggtacagaggctatgggctggcattcat actattgtaaagcggctcgataaagaacaaattacgcacaaccttagagctttggaaatc gacccctgtcgattatcagttgaccaccttgccgttccgactccaggtttacgttcacta ttaaacaccatccaaattttccttgagaaggccccgagtgatttctgggatgccatgcaa accatttccccgcaagctatcattgaacagatcttttataaccctcagttcgatgaattt ctacttgagccgcgcgacgatgatgcgtttgagagaccatcgcctttatcggatatgctc tcgtggatcgagcctttcatggcttcccttaaaggggcacatcaacctcaagcatgccga gtgcttattttccaacttctcaccaggctacaggaatcccgctttccagccatttcgaga tatacttgctttcgaatcggactctctactctcgtttccacattgcggaccttcacagat aacgagtcaacgagaggttcggtcgccagggttgttctatccgacacgcttgaagttacc agcgataatatcaatcatttcatggagcctcctgactttcaaatcgaaggaaacaagaag gttatttccggcttatgcgtggatgttattcgaaacgcccttgccctggagtgtcagtcc ctgaagtctgattacgaggtgatccttcgtcagaaacccatggcacatggcgtgagcaca tactctgctaagatttgggatgcagttgtccagcacttggatgaggataacctcgggctg tccaacgcggctctcatgggtatcttgccccttgttggactggaaaagttctccactaag ggcgagaatagcaaagaaaaaacgcatttcaacgtaatctacggacatttgacacacctt gcctgtcagatccttgaaaggctagctgacttcaagccggaacatctggatcatttattt aagagccatgacacgaatggctcgttgatatcggcacttttttctgcagatttaaacact tatcaggctgctgtagatcttatcaaagctatcagtggccagtctggccgcaaagaagca atatctcaccttctacagtccttctgtgcaacaacgatgtacgggttcagcttctcgttc cgacgaatatccaacatgagaacctttgcatctgcgcctcgaatgcttaaaactggaact gatattatagatgtgctatgtgactctgaaacaggaattcttagaacccgaaaactggtt gatcgtgtggaagccgtttcgcttcaaagattatgggagtatcaatggcaagctctcacc actatattccagcagacggaaacctggcatttgatggggaacgataggatggttatgcta gaattctgccgcgatactatccaatttgcggacctccttttcaaccaattcactattttt gccagcagtatttccgaatttgatccgtccgagtccaagtcggctagggaaaacttagtc aaagcacctgccgccacaatgggttcaatggttaaatggcttcgtttgaaggatgattat ttagcgactactttagtagggcttgttgcgaagcttctccgccgcatgggagaactagac gtaactctggctccagacactttgaagtatattgaagatgtggctcggacatcctcgatc aaaactatcataactgcgcaggaaaaggctgagcttgtgagagctctagagtcatactat aaaaagccattcgtaacggtgccaccggctgctgttccaaagaagaaacaaagtaccatc acctcatatgcaaagccgatcgatcttactggtatttcaagcccctccaggatttctgga agtgatgaggatgaattcgacgatgaaatcccagatgaagtgctcatgcaactctcggga tccgtggagctcaacaaggcccgtattgctgcacaaaaacgccctgagaagcctgccatt ccatcaaaaagtgtgcctaggtcgatcaaacccgtcacaaacgtcctatcatttcgtgag aaacgtgaaagagagaaggaagagaagaagcggcgtgatatggccgagctggctcggttg aaaaagaagatgatcccgtcccaaactgccaatcaaggctctggattgcaaggaattact gttaatattgacgagcatggacctgttgagagtatgatggtctccgggtcagattcggat gacgatagcgaggaggatgatgaaggagatgtgctcggacgaaaggcgatgtctaagccg gatgccgtaaaggcatatgaagagagtaggaagaagttactaagccaacgcggtcctgtt aagaaaaccaaaattgtgcggtctgctaaggatatgcgcgcgaggctctctccagatctg tcactgcttcataggactttgctgagctgggaattcttcgcaaatggtgaccttcctccg aattctggccgtacagattatagtctcgtttcgaatactttctctgacgcggcggattac caaagaactttcgagcccctgttgatattagaagcatggcaaagtttccagtcagcgaaa gaagaaggcggtttcaaagcctttgaaattaaagtttcaaaccgcatgtctgtggatgcc tttgttgaggttactaccttcatgcaacctgcggaggctaaggatttgggattgggggag tcagatttagttctgttatcgaaggcgagcaacccaacctctaatgaaaaggcccctcat tgtcttgcaaggattttccggtcgagtaaaaagaaaggaatgatggaaatttcctatcgc ataaatccttcgaatccactcgtcaattcaattttaccgggaacttctatttttggcgtt cgggtcacgtctttgacacccgtggaaagagaatacggagccttgatggcactaaagtat tacgatttgagtgaggaaatcattagagccaagccgtcgcctatattgaactattcacca gagtctctgaagcccatcattgacacctacaatgtaaacccagcccaggctaaagctgtc aggtcggctatggataatgacgctttcacattgattcagggccctcctggttcgggcaaa acgaaaacaattgtcgccttggttggtgcgatcttgacccctgtatttgctgagcaaaag attgctcgccctggctcatcggtcaatttaaaaccagctacacgaaccacgaactccaag aagctacttgtttgtgcaccgagtaatgcagcagttgatgagttggtcatgcgattcaag gagggggttgtcacatcgagtggacaaaagcaaaatatctctgttgtccgcctcgggcga agcgatgcgataaactcgaatgtcattgatgtaactttggatgagcttgtgaacgcaaag cttggacaaaatggtcgcaaaaacggtaatgagaaggacctacaaacttactactcggag cacaaagaggcctgtactcaattcaacgaagtccgcgatagacttgatcagtgccgtgct aaggggcaaggcgttccatcagagctggagcgggaattcgatctgttgaaacggaagaaa gcacagcttagtcaggctattgataatgccagggatagtaaccaggcagctgcccgcaat gctgaccttgcaagaaaaaaggttcagcaggagatcattgatggagcgcatgtaatatgt gcaactttaagcggaagcggccatgaaatgtttcagtcactgagcatcgaatttgaaacg gttgttatcgatgaggcggcacagtctattgagcttagtgctcttatccctctcaagtat ggttgttccaaatgtgtcctcgtcggtgatcctaagcaattgccgccaactgttctgtcg aaagtcgcgtcacgcttccagtatgaacagagtttgttcgtcagaatgcaagccaatcac cctaaagatgtacatcttctcgatacccagtaccgaatgcatccggaaatcagccgtttc ccaagcgctgcattttacgacggacggcttcaagatgggccgggtatggctaaactacgc gttcggccatggcataagagtgagcttctgggtccatatcggtttttcgatgtgcaagga ctgcattcgagcgctccaaagggccattcgttggtaaatgtagcagaacttcgcgtggcg atgaaactctacgagcggttgattactgattacaggacttacgactttacgggcaggatc ggaattataactccgtacaaaggtcaacttagagaaatgaaaaatcagtttgcaaacaag tatgggaattcaattttcaccaaggtcgagtttaataccacggacgcattccaggggcga gagtgtgaagttattatcttctcttgcgtgcgagcgtcaaaccgtggcatcggtttcttg gctgatattcgccgcatgaacgtcgggttgactcgtgcaaaatcatcactttgggtgctt gggaattcacaatcactcgtccaaggcgaattttggaacgggctgattactgacgctcag tcgagaaatctgtatacccaaggagatgtcttgcatctcttgcagaagccgcaaatcagt ctggataaggagttgggagatgtggagatgatcgacgctccgagcgcgaagagctcgacg ccgtcgagaactggatctgtgacgccgggttggaatggaagtagccgtccgtcctctgct ctttcaataggccgcctctccagcattcctgacaaccaccctacttcctccagagacaca ccaggccacagcccaaaactagtgccttccactggacccgaagggccttcaggaggaaag tttggcttgaatgaattagccatgtgtggattctgcgggagctacgagcatatgacgaca aactgcgataacacggaggccaagttggccagccgcggtgcctgctggcgatgtggagat gtttcgcactccaagcgagattgcgaggcagaacgctgcttccagtgcggcggcattggg catttagcgcgcgcatgcacatcaatagttgttctctccaaacgggagaaggatagaatc gctcgcgaggagcatcaacatgctcaggtcctaaaagcaaatctcgaacggcagcggaaa agacagcttggcgaccacgatccgaaagtgccagttatccaagtgcccccgaaaattgcc tcaaatgtgccgtcatctgcagtattgcctaatcaaaaacgggacttaccaaatactgat cagcgaaattccggcaagcggaaacggatggaaacagagcctcctaatccccgcacaaat gtgaaagttcgaaaacccaatgcgcagtttaacgctcaattcggtgcacctatgaatgca ccaaaggggccgcgagggaagaaaatagatccccatattgttactcctcccaccagcgat ctggtgataccctcaaaatctggccagcgacatcagccgatagactccaaaacccaacaa cctccgcgtcctcgtcctgggacaggaccggagaaacagacggcaaataccgcccagcta ccaccttccacatcacgtcctaataagccgcctccgcgcccaaatgccgaaggcagaggt ccgccacccatgagaaagaagaagccaaccagcatatttattcagccaaaaagaagatga

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