Blastomyces gilchristii: BDBG_06916
Help
Entry
BDBG_06916 CDS
T06540
Name
(RefSeq) 3' exoribonuclease
KO
K12586
exosome complex component RRP43
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_06916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_06916
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BDBG_06916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8502875
NCBI-ProteinID:
XP_002622798
UniProt:
A0A179UTJ6
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MTPSPATTSTSTTTSTSTTTPPNSPKPVQGPPPSLSLPPSQFARLQPHSYLLAHLSPSSP
DSRPPLRVNGRTPSQFRPASINIGSLTHTNASAVVRMGDTVAVCGVRGEILSTDDIAAWN
VSSSSDPSTSKRRKTDSAQAGQLQHKQKQNEPLEDEEDDDNNEDDSEIHAFNLLVPNLSL
NTGCTPSIAASASPSTLAQSLSHKLLSLLHTTRLVRASDLRILHHPPNLTDITTLHASTP
APEREPETKAFWTLYIDILIISHAGNVFDAAWGSMIAALRDTRLPKAWWDMDSEMVLCSD
EVSEARPLRLRGLPVASSFGVFEADEMEKWRIPMPVGEEAEEKGRMGSGKLKAVEYGGSG
GDGRPRRWILADLDGFEESLCAERVCVVVDKEAGGSVKILKLEKNGGLAVGRREMRELVE
LAAGRWEEWKGLFGER
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacaccctcaccagcaacaacctccacctccaccacaacctcaacctcaacaaccacc
ccccccaattctccaaaacccgtccaaggacctcctccctccctctccctgccgccctcc
caattcgccagacttcaacctcattcctacctcctcgcgcacctctcaccttcatctcca
gattcaagacccccccttcgcgtaaacgggcgcacaccatcccaattccgccccgcatcc
atcaacatcggctcgctcacacataccaatgccagcgcagtggttcgcatgggtgacaca
gtcgccgtgtgcggtgtgcgcggcgaaatactctcgacggatgatatagccgcatggaac
gtgtcgtcgtcgtcagatccatccacctcaaaacggaggaaaacagacagtgcgcaggcg
gggcaattacaacacaaacaaaaacaaaacgaaccactggaagacgaagaagatgatgac
aacaacgaagacgactccgagatccacgccttcaacctcctcgtccccaacctctccctc
aacaccggctgtacccccagcatagccgcctccgcctccccctccaccctcgcccaatcg
ctctcccacaaacttctctccctcctccataccacccgcctggtccgtgcctccgatcta
cgcatcctccaccacccacctaacctcacagacataacgaccctgcatgcatccacacca
gcaccagagcgcgaaccagaaacaaaagccttctggaccctctacatcgacatcctcatc
atctcgcacgcaggcaacgtttttgacgccgcatggggctccatgattgccgcgctgcgc
gacacacgcctcccgaaggcgtggtgggatatggatagcgaaatggtgctttgttccgat
gaggtctccgaggcgcggccgttgaggctccggggcctgccggttgcgagttcgtttggg
gtgtttgaggcggatgagatggagaagtggaggattccgatgccggttggtgaggaggcg
gaggagaaggggcgaatgggttctgggaaactcaaggcggtggaatatgggggaagtggt
ggcgatggaagaccgcggcgatggatattggcggatttggacgggtttgaggagtcgttg
tgtgcggagagggtgtgcgttgttgtagataaggaggcaggggggtcagtgaagattctg
aagttggagaagaatggcgggttggcggttgggaggagggagatgagagagttagttgag
ctggcggcgggtaggtgggaggagtggaagggcttgtttggggagcggtga
DBGET
integrated database retrieval system