KEGG   Blastomyces gilchristii: BDBG_06916
Entry
BDBG_06916        CDS       T06540                                 
Name
(RefSeq) 3' exoribonuclease
  KO
K12586  exosome complex component RRP43
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDBG_06916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgh03019]
    BDBG_06916
Messenger RNA biogenesis [BR:bgh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     BDBG_06916
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 8502875
NCBI-ProteinID: XP_002622798
UniProt: A0A179UTJ6
LinkDB
Position
Unknown
AA seq 436 aa
MTPSPATTSTSTTTSTSTTTPPNSPKPVQGPPPSLSLPPSQFARLQPHSYLLAHLSPSSP
DSRPPLRVNGRTPSQFRPASINIGSLTHTNASAVVRMGDTVAVCGVRGEILSTDDIAAWN
VSSSSDPSTSKRRKTDSAQAGQLQHKQKQNEPLEDEEDDDNNEDDSEIHAFNLLVPNLSL
NTGCTPSIAASASPSTLAQSLSHKLLSLLHTTRLVRASDLRILHHPPNLTDITTLHASTP
APEREPETKAFWTLYIDILIISHAGNVFDAAWGSMIAALRDTRLPKAWWDMDSEMVLCSD
EVSEARPLRLRGLPVASSFGVFEADEMEKWRIPMPVGEEAEEKGRMGSGKLKAVEYGGSG
GDGRPRRWILADLDGFEESLCAERVCVVVDKEAGGSVKILKLEKNGGLAVGRREMRELVE
LAAGRWEEWKGLFGER
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgacaccctcaccagcaacaacctccacctccaccacaacctcaacctcaacaaccacc
ccccccaattctccaaaacccgtccaaggacctcctccctccctctccctgccgccctcc
caattcgccagacttcaacctcattcctacctcctcgcgcacctctcaccttcatctcca
gattcaagacccccccttcgcgtaaacgggcgcacaccatcccaattccgccccgcatcc
atcaacatcggctcgctcacacataccaatgccagcgcagtggttcgcatgggtgacaca
gtcgccgtgtgcggtgtgcgcggcgaaatactctcgacggatgatatagccgcatggaac
gtgtcgtcgtcgtcagatccatccacctcaaaacggaggaaaacagacagtgcgcaggcg
gggcaattacaacacaaacaaaaacaaaacgaaccactggaagacgaagaagatgatgac
aacaacgaagacgactccgagatccacgccttcaacctcctcgtccccaacctctccctc
aacaccggctgtacccccagcatagccgcctccgcctccccctccaccctcgcccaatcg
ctctcccacaaacttctctccctcctccataccacccgcctggtccgtgcctccgatcta
cgcatcctccaccacccacctaacctcacagacataacgaccctgcatgcatccacacca
gcaccagagcgcgaaccagaaacaaaagccttctggaccctctacatcgacatcctcatc
atctcgcacgcaggcaacgtttttgacgccgcatggggctccatgattgccgcgctgcgc
gacacacgcctcccgaaggcgtggtgggatatggatagcgaaatggtgctttgttccgat
gaggtctccgaggcgcggccgttgaggctccggggcctgccggttgcgagttcgtttggg
gtgtttgaggcggatgagatggagaagtggaggattccgatgccggttggtgaggaggcg
gaggagaaggggcgaatgggttctgggaaactcaaggcggtggaatatgggggaagtggt
ggcgatggaagaccgcggcgatggatattggcggatttggacgggtttgaggagtcgttg
tgtgcggagagggtgtgcgttgttgtagataaggaggcaggggggtcagtgaagattctg
aagttggagaagaatggcgggttggcggttgggaggagggagatgagagagttagttgag
ctggcggcgggtaggtgggaggagtggaagggcttgtttggggagcggtga

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