KEGG   Blastomyces gilchristii: BDBG_07056
Entry
BDBG_07056        CDS       T06540                                 
Name
(RefSeq) DNA polymerase sigma subunit
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDBG_07056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgh03019]
    BDBG_07056
   03016 Transfer RNA biogenesis [BR:bgh03016]
    BDBG_07056
Enzymes [BR:bgh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BDBG_07056
Messenger RNA biogenesis [BR:bgh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     BDBG_07056
Transfer RNA biogenesis [BR:bgh03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    BDBG_07056
SSDB
Motif
Pfam: MTPAP-like_central PAP_assoc NTP_transf_2 Polbeta
Other DBs
NCBI-GeneID: 8502780
NCBI-ProteinID: XP_002622545
UniProt: A0A179UWZ1
LinkDB
Position
Unknown
AA seq 681 aa
MPPQFEFRGNRQGGRPRQQPEFTFRSRFPKTSARPLLSMSQRETTPELLCCPQTTEQKAR
KFMSLEDLTDSDEAEMEVSSADEGSQPPRKKQVTESSAGPVANAPRWSNPDPYTVLPPSD
ENPVKRKDFVKLIRKARIQSTPQPKPDEHNAVVLNDDFISFGMDDMEMDETPENAPRGPK
SSMNQDGDPALGSRKRTHDDEIIGQSRRPGAVGKFFNSDGSILLKWKPFEDQNTTPWIDS
LGPSIVHLGSRLHNEILSFYHWVKPKPFENSIRNDLIARLQRHFERRHYSSQLRAFGSFA
SGLYLPTADMDLVLLSRQFIRQDRKVLCQRPREIYSFAAYLKDLDIAVPGSVETIAHAKV
PIIKFVDRLTGLKVDLSFDNSTGIAANETFQVWKSQFPAMPIIVSVIKQFLLLRGLNEVP
TGGLGGFSIICLVTSLLQHLPYSGAEPNLGGVLMDFFDFYGNKFDSRRVGIQFDPPGYFD
KKLLGVYQANKQQRLAIMDPNNPDNDISGGTKEIPLIFRAFADAYQILKQDMVQAAFFPQ
KRMNSLLGSIIGANYESYDRQRTHLTSLCETDPRFAHFFQPPPPNSPPPEAPATPPPPPP
EEPGTVAARGTEHNNSSQNSKLSKKQSTALDRANRLRKLRPDLKKVPKFVALDAAVKLGG
YSSIVEMDSDLSRRGKAPFQQ
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcccccgcagttcgagtttcgcgggaacaggcaggggggaagaccccgccagcaacct
gaattcacgtttcgatctcggttccccaaaacttcggcgcgaccattattgtcaatgtcg
caaagagaaacgacacctgaactcttgtgttgcccgcaaaccacagagcagaaagcaaga
aaatttatgtctttagaagatttaactgatagcgacgaggcagagatggaggtttcttct
gcagatgaagggtcccaacctccacgaaagaagcaggttaccgagtctagcgcaggtccc
gttgcaaacgcccccagatggtcgaatccggacccgtacaccgttttgccgccgtctgat
gagaatccagtgaagaggaaagactttgtgaagctgatccgcaaggcaagaatacagtcg
accccacaacctaaacctgatgagcacaatgctgtcgttttgaacgatgattttatatcc
tttggcatggatgatatggaaatggatgagacacctgaaaatgcgccccgggggccaaaa
agctcgatgaaccaagatggtgaccctgcccttggcagcagaaagcgaacccatgacgac
gaaataatcgggcagtccaggcgccctggcgccgtgggaaagttctttaattctgatgga
tcaatacttctcaagtggaagccgttcgaagaccagaatacgactccttggatagattcc
ttaggcccttctatcgtccatttaggatccaggctgcacaacgaaattctcagtttttac
cactgggtcaaacccaaacctttcgaaaattcgattaggaatgacttgatcgcgcggctc
cagcgtcactttgaaagaagacattatagctcccagctcagggcttttggttcattcgcc
tctggactctatcttccgacagcagatatggatcttgtcttgctctcaaggcagttcatt
cgacaggaccgcaaggttctttgtcaacggccacgtgaaatctactcgtttgccgcatat
ctcaaagatctcgacatcgctgtgccgggatccgttgaaaccattgctcatgctaaagtc
cctattatcaaattcgtagacaggcttaccggcttgaaagttgatttgtcattcgacaac
tccactgggatagcagcgaacgaaacatttcaggtttggaaatctcaatttcccgccatg
cctatcattgtctccgtgataaagcagtttctgctgctccgcggcctcaatgaggtacca
actggtggtttgggtggattctcgatcatttgtttagtcactagcctcctccagcacctc
ccgtacagtggtgcagaacctaatctgggcggtgttctcatggacttcttcgatttctat
ggtaataagtttgattccaggagagtcggcatacagttcgacccgcccggctatttcgat
aagaaactccttggcgtctatcaagcaaacaagcaacagcgacttgcaattatggaccct
aacaaccctgataatgacatctctggaggaacaaaggaaattccactaattttcagggcc
tttgcggacgcttatcaaattcttaagcaagatatggtgcaagcggctttcttcccgcag
aaacgcatgaatagccttctaggctcgattatcggggcgaactatgaatcatacgaccgt
cagcgcacacatctgactagtctatgtgaaactgatcctcgatttgcacacttcttccag
cctcctcccccgaatagccctccaccagaggcgcccgcgacacctcccccacctccgcca
gaagaaccggggactgtggctgcaagagggaccgagcacaataactcatcacaaaattcc
aagctatctaaaaagcagtccacagcattagatcgtgccaatcgacttaggaagcttcga
cctgatttgaagaaagttccgaaattcgtggccctcgacgctgctgtgaaactgggaggg
tactcctcaattgtagaaatggatagcgacttatcccgtaggggaaaggctccttttcag
cagtga

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