Blastomyces gilchristii: BDBG_07248
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Entry
BDBG_07248 CDS
T06540
Name
(RefSeq) transcription initiation factor TFIIH subunit 1, variant
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03022
Basal transcription factors
bgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BDBG_07248
09124 Replication and repair
03420 Nucleotide excision repair
BDBG_07248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgh03021
]
BDBG_07248
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_07248
Transcription machinery [BR:
bgh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BDBG_07248
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BDBG_07248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
CIS_ATPase_hel
DUF5357
Motif
Other DBs
NCBI-GeneID:
8502586
NCBI-ProteinID:
XP_002622296
UniProt:
A0A179UXJ1
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAARVESQAVAYKKKDGSLTMASDGQSITWAPKGSSSGLSPVTIKVADITHLQQTPATSP
KVMLKVFVQVSNAGPSPSPHKAPPGATEQYIFSFTAGPNARAEADAIKDALSATIQAIKT
GQAPAKEGAPAAMAIANALSSVAGKPPWDDDNRLIADAELQQSLLKSDPALQRVFMETLR
TKAETVSSAQFVSQFWSTRVHLLRAHAIEKSQTRGSYNVLSTLKPRVEDNVTKLNISKEQ
IQLIFSQHPLVKKVYDENVPKLTEQQFWSRFFQSRLFKKLRGERVTEADATDPILDKYLK
VDEYAGRSWTANVPHIIDLEGNEENHSQRQGNRPYFDMRPADMDKVPIIRTLNSLSEKII
ANVTPVDADPSAPIGLSEEAYNELQLRDLRGDEELKRITLNVRDQSRFFTGTKPTEDEET
RAFAQQDPQEVLHTLQNDLDSTFPPNKRGDVRLDRIVEPEETDSADDNVNDTPNQQQSTK
SKQERVGSRAALAAASSQIFSAIRDRKSQLSSPSTTSPETCGLPPAIFDRLTLTHATTTE
FLHQFWQAFLSGNPDRAGEIASLVESLNRAIDRIRAVADEAEKERQGEIERLKQHAREVM
ASTGKNIRPNLKGVEGGEKTVNALLEPTVKALGKALEEYRKALVQAQQVQGQDGTATPAA
GGGG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcgtgtggaaagccaggcggtggcatacaagaagaaagatggctccctgacg
atggcttcggacgggcaatcgattacatgggcacctaaggggagtagttccggattgtcg
ccggtgacgattaaagttgcggatattacacacctccaacaaacccccgcgacaagtccg
aaagtcatgctgaaggtattcgtacaagtttccaacgctggcccaagcccgagtccccac
aaagccccgcctggtgccacggagcagtatattttttcctttacggccggaccaaacgcc
cgtgccgaggctgatgcgatcaaagatgcccttagcgcaaccatacaagcaataaagaca
gggcaggctccggccaaagaaggcgcaccagccgccatggcaatcgcgaatgcgctgtcg
tcagtggccgggaaacctccgtgggacgacgataaccggctaatcgcggacgcagaacta
cagcaatccctcctaaaatccgatccggcactgcagagagtgttcatggagacgcttcgc
acaaaagccgaaacggtcagtagtgcgcagtttgtgtcacagttttggtcgacgagagtg
cacctgctgcgtgcgcatgcgattgagaagtcgcagacgcgcgggtcatataacgtactc
tcaacgttgaagccgcgggtggaggataacgtgactaagcttaatattagcaaggaacag
atccagctaatattcagccagcatccgctggtgaagaaagtgtatgatgagaatgtcccc
aaactaacagagcagcagttctggtcgcgcttttttcagagtcggttgtttaagaagctg
cgcggtgaacgggtgacggaagcggatgcgactgatccgattctagataagtatcttaag
gtcgacgagtatgcgggccgttcgtggacggcgaatgtgccacatattattgatcttgag
gggaatgaggagaaccatagccagaggcagggaaatagaccatacttcgacatgagacct
gctgatatggataaagtgccaattatacggacattgaactcgttaagtgagaagatcatc
gcgaatgtcacgccggttgatgctgacccttctgcaccgattgggctgagtgaggaggca
tataatgaattgcagcttcgtgatcttcgcggggatgaggagttgaagcgtattacattg
aatgtgcgcgaccaaagtcgtttcttcactgggacaaaacctacggaggatgaggagaca
cgggcatttgcgcagcaggatcctcaggaggttctccacacgttacagaacgacctagac
tccacgttcccccccaataagcgcggtgacgttcgactggaccgcattgttgagcctgag
gaaaccgacagcgctgatgataatgttaatgatacccctaaccaacaacagagcacgaaa
tcaaaacaagaaagggtcggctctagagcggccctcgctgccgcgtcttcccagatattc
tccgccatccgtgaccgcaaatcccaattatcctccccctccacgacctcgccagaaacc
tgcggtctccccccagccatcttcgaccgcctgactctcacgcacgccaccacgaccgaa
ttcctacatcaattctggcaagcgttcttatccggcaacccggaccgggcaggcgaaatc
gcgtccctagtcgagtcgttgaaccgcgccatagatcgtattagagccgtggcagacgag
gcggaaaaggagcgccagggggaaattgaaaggctgaaacagcatgcgagggaagtcatg
gcgtcgacggggaaaaatattcggccgaatttgaagggggtcgagggtggggagaagacg
gttaatgcccttctggagccgacggtgaaggcactggggaaggcgttagaggagtatagg
aaggcgttggtgcaggcgcagcaggttcagggtcaggatggtacagccacgccagcagcc
gggggagggggatag
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integrated database retrieval system
