Blastomyces gilchristii: BDBG_07297
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Entry
BDBG_07297 CDS
T06540
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03420
Nucleotide excision repair
bgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
BDBG_07297
09124 Replication and repair
03420 Nucleotide excision repair
BDBG_07297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgh04121
]
BDBG_07297
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_07297
Ubiquitin system [BR:
bgh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
BDBG_07297
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
BDBG_07297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_SCAP
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
8508891
NCBI-ProteinID:
XP_002622345
UniProt:
A0A179UVM0
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MNSYLLNRSQGSVSSSAFHVAHNAHLIRSIEPAPGLRFSSHPAAPALNQGESEPTEDGWK
GEEQDELRAHKAGVNVLTIDQYEKRFMVSGGADASVHLWDLETRGSESSHLYKSIASVTK
STDPSAHTHALTSISIYPFDPTPSTILTTSHDTTLKLSSLQAPTIVPVYTFSLHSTPYSH
SFSSHPSSLLLTAVGTSDKTVRLLDLRSGLATHALPGHSAAVLSVSWAPHHEYLLASASN
DNRVILFDVRRGGHNSALASLDMDDAVGVIAPHDAPSSFSCRNPFVPGARAHNGAVTGVR
WTSNGSHIITSGHDARIRVWDASTGANSLVHFGPRIRNSSSLHLAERAPLVLPSDITGAV
LDTLLWPNYGDQDDRGEIFMFALRDGTFIKRLNVPGVPSSRQKMRGKPTALSAARINGLA
WRGSGGSGEGMELFSAHGDGTIRAWVSRTADEEHEIAEEEEEMEDKKRKRDVLDEVYRGL
MNRNVTFT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtatctgttgaatagatcccaaggatctgtcagctcctccgcgttccatgtg
gcccacaatgcccacctcatccggtcaattgagcctgcgccgggtctcaggttttctagc
caccccgcagctcctgctctgaaccagggagaaagtgaaccgacggaggatggctggaag
ggtgaggaacaagacgagcttcgggcccataaagcaggcgtaaatgttctgacaatcgat
caatatgaaaagcgcttcatggtctctggtggagcggatgcgtctgtccatctctgggat
ttggagactcgtggatccgagtcaagccatctttataaatccattgcttcagtgacaaaa
tcaacagacccatcggcacatacacacgcattaacttccatttcgatatatcccttcgac
ccgactccgtcaaccatattaactacttcccatgacaccactctaaagttatcttcgctt
caagctcctacgatagtcccagtctatacattttcactccactcaactccgtactcacat
tcattctcgtcgcatccatcgtcgctacttttgactgctgtaggaacctcagataaaacc
gtaaggctactagaccttcgttccggccttgccacccacgctttaccaggccatagtgcc
gctgtcctatcggtttcctgggcaccgcatcatgagtatctgctagcatctgcctcaaat
gataaccgagtcatcctttttgatgtccggcgaggaggacataattccgcccttgcttcg
ctggatatggatgatgcagtcggcgtaattgccccgcacgatgcgccctcttccttctcc
tgccgtaatccatttgtgcctggcgcccgtgcacataacggggcagtgacgggcgtgcga
tggacatcaaatggctcccacataatcacttcaggccatgacgcccgcattcgagtctgg
gacgcttccacaggcgcaaattcgctggtccattttggcccgcgcatccgcaatagttcc
tcgctgcatctcgctgaaagggcaccactagttttacccagtgatatcacaggtgcggtg
cttgatacactactatggccgaactacggcgatcaggacgataggggggagatcttcatg
ttcgcgcttcgggatggtacatttatcaagcgcctgaatgtgcccggcgtaccgagctca
cggcagaagatgcgaggaaagcccacagctcttagcgctgcgcgaataaatggccttgca
tggcgcgggagcggagggtccggcgaagggatggagttgttttctgcccatggagatggg
acgattagggcctgggtctccagaactgcggatgaggaacatgagatcgccgaggaggag
gaggagatggaggacaagaagaggaaaagagatgttctggacgaggtgtaccgtggcttg
atgaaccggaatgtcactttcacttga
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integrated database retrieval system
