Blastomyces gilchristii: BDBG_07923
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Entry
BDBG_07923 CDS
T06540
Name
(RefSeq) pre-mRNA polyadenylation factor fip1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BDBG_07923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_07923
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BDBG_07923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
8502099
NCBI-ProteinID:
XP_002621705
UniProt:
A0A179UZP1
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MATMMEEDDDELYDPTYIAPSTEASKDADAHSGGAKLAEAENKAQEEEQEVEEEEEEEEE
DDDDFKIITEAPPDAVIEQPSRHSILRNESLRPSSVEATSAPKPSTPSIAPKVETPTLPH
ATAAKPVAPQKPGSAYPAQHTSTIDINANPVHPTTNKPILSTDLDADFPTENDKPWRRPG
SDMTDYFNYGFDEFTWASYCLKQQTLRKDIVDQKKQMEEMHAFLGGGLPGIPGPNPGPGP
GTPNIVPGGGTPGPGPGPPQATGPPPNAIPGMPPGMGDMSQEMMQGMFTSMMAQGLDPAS
MDPMTFMQHAQAMMGGGQPGPGPGPGPGGPSGPPGGQPGFGGPGPGQPFGVPGGGQPQMG
YGGYEQRGGGFVRGKGGRRW
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatgatggaggaggacgatgacgaactctacgatcccacatatattgcacct
tccactgaggcatccaaagacgctgacgcacattctggcggagcaaagctagccgaggca
gagaacaaggcacaggaggaagaacaagaggtagaggaggaggaagaagaggaggaggaa
gatgatgatgactttaaaatcataacggaggcccctccggacgccgtaattgagcaacct
tcccgacattctatccttcgaaacgaatctctacgaccttcgtcggtggaagcaacaagc
gcacctaaaccttctactccatctatcgccccaaaagttgaaacacccactctccctcac
gccacagccgcgaagccagtagcccctcaaaaaccaggttcagcttaccctgctcaacat
acatcaactatagatatcaacgcaaaccccgtccaccctactaccaacaaacctattctc
tccaccgatttagatgccgatttccccacagaaaatgacaaaccatggcgcaggccggga
tcagacatgaccgactatttcaactatggttttgacgaatttacttgggcgagttactgt
ttgaaacagcagacattacgaaaggacatcgttgaccagaaaaaacaaatggaggaaatg
cacgcattcctaggtggcggtctacctggaataccaggtccaaacccaggcccaggtcca
gggactccaaatatagtgcctggtggaggtactccaggcccgggcccaggaccaccgcaa
gccaccggtcctcctcccaatgcaataccaggaatgcctcctggtatgggtgacatgtcg
caggaaatgatgcaaggaatgtttacgagcatgatggcgcagggactggatcctgcctca
atggatccgatgactttcatgcagcatgcacaggcaatgatgggaggaggccagcctggg
cccggtccgggtccgggcccgggtggtcctagcggtccgccgggtggccagccaggtttt
ggtggaccaggtcccggacaaccgtttggtgtaccaggcggaggccagccgcagatggga
tacggcggatacgagcaaaggggtggtggatttgttagagggaagggtgggcgaaggtgg
taa
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