KEGG   Blastomyces gilchristii: BDBG_08299
Entry
BDBG_08299        CDS       T06540                                 
Name
(RefSeq) exosome complex subunit Csl4
  KO
K07573  exosome complex component CSL4
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BDBG_08299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgh03019]
    BDBG_08299
Messenger RNA biogenesis [BR:bgh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     BDBG_08299
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     BDBG_08299
SSDB
Motif
Pfam: EXOSC1 ECR1_N EPL1
Other DBs
NCBI-GeneID: 8501813
NCBI-ProteinID: XP_002621268
UniProt: A0A179UY53
LinkDB
Position
Unknown
AA seq 290 aa
MVISLPSIAVPGQRLGPASSFIPGPGTHIQDAFVCASIAGPVVLQKGGEEEESRQQLQKQ
QAQQQQQQRTLVMVARSFAQTLEGGAYGAMTGNNSNNSSKSGSSISRTPQAQKPPVNTSP
LPTPTTKRPIKHKYNTLPAVGSIVLARVTRVQKRQATLSILVVLDDNPSSPYPTTTAVND
LPASLLSTTNADPLNADDLRFQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQ
SFYYCSTARNELGVVMGRSEEGNVLVPVSWREMVDGKSGRREARKVARPY
NT seq 873 nt   +upstreamnt  +downstreamnt
atggtgatctccctcccgtcaatcgctgtccccggccagcgattgggccctgcctcatcg
ttcattccaggcccgggaactcacatccaggatgccttcgtctgcgcctcgattgccggc
cccgtcgttttacagaaggggggggaggaagaggagtcgagacagcaattgcagaaacaa
caagcacaacaacagcaacaacaaaggacacttgtgatggtcgcgcgctcgtttgcgcag
acgcttgaagggggggcctatggagctatgactggtaataatagtaataatagtagtaag
agtgggagcagtataagccgcacgccgcaggcacaaaaacctccagtaaatacctcccca
cttccaacaccaacaacaaaaagacccataaaacacaaatacaacaccctccccgccgtc
ggctccatcgtcctcgcccgcgtcacccgcgtccaaaagcgccaagcaaccctctccatc
ctcgtcgtcctcgacgataacccctcctccccctaccccacaactaccgccgtcaacgac
ctccccgcctccctcctctccaccacaaatgccgaccccctcaatgccgatgacctccgc
ttccaagcactaatccgcaaggaagacgtgcgcgccgtcgagaaggaccgcgtcgtgatg
gacgagatgttccgcgtcggcgacattgtgcgggccgtggtgatttcgctaggcgatcag
agcttctattactgctcgacggcgaggaatgagttgggcgttgtgatggggcggagtgag
gaggggaatgtgcttgtgccggttagttggagggagatggttgatgggaagagtgggagg
agggaggcgaggaaggtcgcgaggccgtattaa

DBGET integrated database retrieval system