Blastomyces gilchristii: BDBG_08996
Help
Entry
BDBG_08996 CDS
T06540
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_08996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_08996
03036 Chromosome and associated proteins [BR:
bgh03036
]
BDBG_08996
Enzymes [BR:
bgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BDBG_08996
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
BDBG_08996
mRNA degradation factors
5'-3' decay
Decapping complex
BDBG_08996
Chromosome and associated proteins [BR:
bgh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
BDBG_08996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
8501288
NCBI-ProteinID:
XP_002620701
UniProt:
A0A179V1B6
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MADALASQLNSTKLGDNHSEKWRENLKAPPKDTRTQTEDVTATKGLEFEDFYIKRELMMG
IFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQALIL
VPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLQDDIIRLNEAVHIIVGTPGRILDLAS
KGVADLSECSTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFKDKH
MRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLA
KKITELGYSCFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDF
PKNAETYLHRIGRSGRFGHLGLAINLINWEDRYNLYKIEQELGTEIQPIPQSIDKKLYVY
DTPDTIPRPISNAPQHHSQQPASAIAQRPNSPEGHNRRQGQHQYSSNRGRGSYRGGRGQG
HRGGHGENHRQNGTAPRPNAAASAPAS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcgcttgcttcgcaattgaatagcacaaagctaggagataaccactcagag
aaatggagagaaaatttaaaggcgcccccaaaagacacacgaactcaaactgaagatgtc
actgcaacaaaaggcctggagttcgaggacttctatattaagcgcgaattaatgatgggg
atttttgaggccggctttgaaaaaccttctcccatccaagaagaaactatacccgtggcc
cttaccggtcgggatatccttgcacgcgcgaaaaacggaacagggaagactgctgctttt
gttataccgaccttagaacgtaccaatcctaaaaattcgaaaacacaagccctcatcctc
gttcccacgcgggaactagcccttcaaacatcgcaagtctgcaagacactcgggaaacac
ctaggtatcaatgttatggtcacgaccggcggaacgggactccaagatgatattatacgg
ttgaatgaagctgttcacatcatcgtcggcacacctgggagaattctggatcttgctagc
aaaggggtggcagatctgtcagagtgctcaacttttgttatggacgaggcggacaagctt
ctctcgcctgaattcaccccggtcattgagcaacttttgtcattccatcctaaggaccgc
caagtaatgcttttcagtgccacattcccaatgatcgtcaagtctttcaaggacaaacat
atgagaaacccttacgagatcaaccttatggacgagcttacacttcggggcatcacccag
tactatgcctttgtggaagaaaagcaaaaagttcactgcctgaacactctcttctccaaa
ctccaaatcaaccagtctatcattttctgcaattctaccaatcgcgtcgaacttctagct
aagaagatcaccgaactgggatactcgtgtttttattctcatgctaaaatgctgcaacat
aaccgaaatcgtgtcttccatgacttccgcaacggggtttgccgaaacctggtctgctca
gacctgttgacacgtggcatcgacattcaggctgtgaacgtcgtgatcaactttgatttc
cccaagaatgccgaaacctatctccatagaattggccgttcgggtcggtttgggcacctg
ggtttggctattaacctgatcaactgggaggatcgatataacctgtacaagattgagcag
gagttgggcaccgaaatccagcctatccctcaatctattgacaagaaactctatgtttat
gacacacctgacaccataccccgacctatttctaacgctccccagcaccacagccagcag
cctgcctctgcaattgctcaacgtcccaacagcccagaaggccataatcgtcgacaaggc
caacatcagtattcttctaacaggggtcgtggatcctaccgtggaggtcgtggccaagga
caccgaggtggtcatggagaaaaccaccgccagaatggaactgcaccgcggccaaacgcc
gcagcgtctgcacccgcatcataa
DBGET
integrated database retrieval system