Blastomyces gilchristii: BDBG_09110
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Entry
BDBG_09110 CDS
T06540
Name
(RefSeq) WD domain-containing protein
KO
K12601
superkiller protein 8
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_09110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_09110
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
BDBG_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
eIF2A
WDR54
RMC1_N
Nup160
Motif
Other DBs
NCBI-GeneID:
8501182
NCBI-ProteinID:
XP_031581234
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MSKQYLTLHTIDNAHPVEIFSLALTPSQLISCSGASSLKVHSTAETDFPLAQSIDGAHKI
GCHHLAASRDGTRLVSVGFGGEVKVWSSVAGGVWVADEGVGGATGGKGDTKRKVSEIWAA
ALSSDGEYLAGTTLDGHIKVWHLDGTGEDSKVSQIRDLETKGSFGMCIDLSADGSLTASG
HQNGNVYIFLNETGRMIHSLSGLVLPVRAVTFSPGGKLLAAAGDSRVIQLYETSSGEQVA
TLTGHTSWITSLDWSHTGEFLLSSSLDGRVKVWSIERRACVATHSESDVAIWSAKWLPKV
GATAEKFVTANAKGRITFYREATGG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcaatatttgaccctacatacaatcgacaatgctcaccccgtcgagatattc
tctctcgccttaaccccgagccaactgatatcctgctcgggcgcatcttcgctcaaagtc
cactccaccgccgagacagatttccccctagcccagtccatcgacggcgcgcacaagatt
ggctgccaccacctagctgcaagcagggatggcacaaggcttgtgagcgttgggtttgga
ggggaggttaaggtgtggtcttccgttgcgggcggggtgtgggtcgcggatgagggggtt
ggtggagcgactggtgggaagggcgacaccaagcggaaagtcagcgagatatgggccgcc
gcactctcttcggatggcgagtatctcgccggcacgacgctggatggacatattaaagtc
tggcacctggatgggaccggggaggatagtaaggtgtctcagatccgcgacctggagacg
aagggtagctttggcatgtgtattgacctgtcggcagacggcagcctgacagcatccggc
caccaaaatgggaacgtctatatcttcctcaatgagacggggcggatgatacattctctg
tccggcctagtcttacctgtccgagccgtaactttctcgccgggaggaaaactgctcgca
gcagcgggcgactccagagtaattcagctctatgaaacgtcctctggcgagcaggtagct
acattaacggggcatacgtcctggattacctctctggactggagtcataccggagaattt
cttttgagctcatccctcgatggcagggttaaagtgtggtcgattgaacggagggcgtgt
gtggcgacgcactctgagtcggatgtggctatatggagtgcgaagtggttgccaaaagtt
ggagcgacggctgagaagtttgtcacggcgaatgctaaggggcgtatcactttttatcgg
gaggctacagggggatga
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integrated database retrieval system