Blastomyces gilchristii: BDBG_09178
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Entry
BDBG_09178 CDS
T06540
Name
(RefSeq) snoRNA binding protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BDBG_09178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgh03009
]
BDBG_09178
Ribosome biogenesis [BR:
bgh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
BDBG_09178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR19_1st
DUF7165
Motif
Other DBs
NCBI-GeneID:
8501133
NCBI-ProteinID:
XP_002620492
UniProt:
A0A179V3U0
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MLSSIDSDAFGFPVAKRQKVAPGQLVSKDTAAPLPPSSRIFSPFRTLGLVSPTTVPFTSV
PLGKTTFQITTSVGRSLQTYDLRRGLSLVFLTRPQTPTVITAICAWKDKVLAAWGGGIWV
FKRGKKVGELPLPSSPATTGGTTEPIEQLLVFGSWIVGCGSNTIRVWKSTTFEHYTTLTP
PSQRSASSKGGATRVLTGRICNMPTYLNKIFAGRQDGSIDIWNLSTGKLVYTILPTTPDA
GAVTAMEPTPALSLLAIAYSSGALTIHNVRTDQAVLQLRSPASASTTAPISPITCISFRT
DDLGAGHDGRKAGVMATASADSGDITMWDLNNGGRVTGVLRDAHESSSSSSSSEEPGISK
IEFLNGQPVLVSTGTDNALRSWIFDETPFSPVPRPLHSRSGHSAPITTLRFLPASSDDSD
AVGKWILSASKDRSLWGLSLRKDSQSTELSQGHVKQKSKKKGYLGARTEDFKTPEITCVA
CSLNRDGGMGTAAGAAGASGPAWANVKGGTTESTNLTGWESVVTGHRGDRFARTWFWGRK
KAGRWAFATRDGTEVKSVAVSPCGTFALVGSAGGSIDMYNLQSGMHRQSFPARVTPAQAR
KLKIMQLDEMDDMETGASGKRGFQMGEGKHTSAVTGLMVDALNTTVISCGLDGKVKFWKF
TTGQLLHELDWHPMCSITGLRQNASSDLIALSCDDLSIRVIDIETRKLVRELWGAIGQIN
DFCVSNDGRWIIAASMDSVIRVWDLPTGHLIDAFRLANTCTALAMSVTGEFLATAHADGV
GVSIWNNRSLFTHVPTKHIEEDAIVEVSAPTASGEGGAAILEAAFEEDAGDGGDEGPLVL
PTEQLSSDMMTLSITPKSRWQTLLHLDVIKERNKPKEPPKVPQKAPFFLPSTLTKPDSDS
TSLIPAAGAEEDTSETKKTTPAERSRIAKLQRANDPSMQASKFTTLLHSCSSASSNSTKQ
TGNPYDPFIAYLKSLPPAKADLEIRSLDPGLLSGNRHGATNELVAFVQALTAQLRTRRDF
ELVNAWMAVFLRVHGDVVDVGEDENGEGNDDDDDDGGDGEGEAEGTRTALREALGEWKVE
QEREGRR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgtcaattgacagcgacgcctttgggttccctgtcgcgaagagacagaaggtc
gccccaggccagctcgtctcgaaagatactgctgctcctctccctccgagctcgcggata
ttctcacccttcagaactctaggacttgtatccccaaccactgtgcccttcacctctgtc
ccgctgggcaaaaccacattccaaatcaccacctctgtcggcagatccctgcagacctac
gacctccgccgtggcctaagcctggtcttcctcacacgcccccaaacccccacagttata
acggcaatatgtgcctggaaggacaaggtgttggctgcctggggtggtggtatctgggtg
ttcaaacgtgggaagaaagtgggagaactgcccttgccctcctcaccagcaactacagga
gggacaaccgaaccgattgagcagctgctagtgtttggctcgtggattgttggctgcggc
agcaataccattcgcgtgtggaagtctacgaccttcgagcattacacgaccctcacccct
cccagtcaacgatcagcatcgtccaaggggggtgccactcgcgtcctgacgggccggata
tgcaacatgcccacatacctcaacaagatcttcgccggccgccaggatggcagcattgat
atctggaacctttccacggggaaactggtctacaccatcctccccacaaccccagacgca
ggcgccgtgacggccatggagcctacacccgccctctcccttctcgcaatcgcctacagc
agcggagccctgaccatccacaacgtcagaacggaccaggccgtcctacaactccgctct
cccgcttcagcttcaacgaccgcgcccatctcgccaatcacctgcatctccttccgcacc
gacgatctaggcgccggccacgacggccgcaaagcaggcgtcatggccactgccagcgcc
gacagcggcgacatcaccatgtgggacctgaacaacggtggcagagtcaccggcgtcctc
cgcgacgcgcacgaatcctcctcctcctcctcctcctccgaagaacccggcatcagcaaa
atcgagttcctaaacggccaacccgtcctagtatccacaggcaccgacaacgcgctccgc
tcctggatcttcgacgagacccctttctcaccggtccctcggcccctgcactcacgcagc
ggccactcggcgcccatcaccaccctccgcttcctccccgcctcctccgacgactccgac
gccgttggcaaatggattctcagcgccagcaaggatcggagtctatggggcctgagtctg
cggaaggattcgcagagcacggagctgtcgcagggccatgtgaagcaaaagagtaagaag
aagggttatctaggggcgcggacggaggactttaaaacgcccgagattacctgtgtggcg
tgctcgttgaatagggatggaggcatggggactgcagcgggcgctgcgggtgcgagcggg
ccggcctgggctaatgtgaaggggggcactacggagtcaactaatttgactgggtgggag
agtgttgttacgggccatcggggtgataggtttgcgcggacctggttttgggggaggaag
aaggctgggcgatgggcttttgcaacgcgtgatggtacggaggttaagagcgtcgctgtt
tcgccgtgtggcacctttgcactagtcgggtccgcgggtggctcaattgacatgtacaat
ctgcaatccggcatgcatcgacagtcgttcccagcgcgggtaactcccgcccaagcgagg
aagttgaagatcatgcaattggatgaaatggacgatatggagactggggccagcggcaaa
cgaggcttccaaatgggcgagggaaaacacaccagcgccgttacagggttgatggttgac
gcactgaatactacagttataagctgcgggcttgatgggaaagtgaagttctggaaattc
actacgggccaactcctgcacgaactagattggcatcccatgtgctctatcaccggcctc
cgccagaacgcctccagcgacctgatcgccctaagctgcgacgacctctccatccgcgtc
atcgatatcgagacgcgcaaacttgtccgcgaactctggggcgccatcggccagatcaac
gacttctgcgtctccaacgacggccgctggatcatcgccgcatccatggactccgtcatt
cgcgtctgggacctgccaacaggccatctgatcgatgccttccgtctggcgaatacgtgt
accgcgctcgcgatgtcggtgacaggcgagttcctggcgacggcgcatgcagatggggtt
ggggtgagtatttggaataatcgaagcttgttcacgcatgtcccgacgaagcatattgag
gaggatgctattgtggaggtgagcgcgccgacggcgtcgggggagggtggggcggcgatt
ttggaagctgcgtttgaggaggatgcgggggatggaggtgatgaggggccgcttgtgttg
ccgacggagcagttgagtagtgatatgatgacgttgagtattacgccaaagagcaggtgg
cagacgctcttgcatcttgatgttattaaggaacgaaacaaacccaaggaacccccaaag
gtcccacagaaagcccccttcttcctcccttccaccctcaccaaacccgattccgactct
acctcgctcatcccagcagcaggggcagaagaagacacctcagaaaccaaaaagaccacc
ccagccgaacgctcccggatcgccaaactccaacgcgccaacgaccccagcatgcaagca
tccaaattcaccaccctcctccattcctgctcctccgcctccagcaatagtacgaagcaa
accggaaacccctatgaccctttcatcgcctacctcaaatccctccccccggccaaagcc
gatctagaaatccgctctctcgacccaggcctgctaagtgggaatagacacggcgctacc
aacgagctggtagcgttcgtgcaggcgctgacagcgcagttgcggacgaggagggacttt
gagcttgtgaatgcgtggatggctgtgtttttgcgggtgcatggggatgttgttgatgtt
ggagaagatgagaatggggaggggaatgatgatgatgatgatgatggtggtgatggtgag
ggggaggcagaggggacaaggacagcgttgcgggaggcgctgggggagtggaaggttgag
caggagcgggaggggaggaggtag
DBGET
integrated database retrieval system