Blastomyces gilchristii: BDBG_09240
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Entry
BDBG_09240 CDS
T06540
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BDBG_09240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgh03041
]
BDBG_09240
03009 Ribosome biogenesis [BR:
bgh03009
]
BDBG_09240
Enzymes [BR:
bgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BDBG_09240
Spliceosome [BR:
bgh03041
]
Complex A
U1 snRNP components
U1 related factors
BDBG_09240
Complex B
BDBG_09240
Ribosome biogenesis [BR:
bgh03009
]
Eukaryotic type
Pre-60S particles
Helicases
BDBG_09240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
8501096
NCBI-ProteinID:
XP_002620418
UniProt:
A0A179V3Z1
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSYGGGYGSSRDHYGSGGGGHSRGGGYGGGGYGGSNGHSHGHSSGGGYGSYGGGAGGHGS
GYGGAGGDRMSNLGAGLKTQNWDLSTLPKFEKSFYKEHPSVTQRSSQEVDAFRKEQEMTV
QGKNVPRPVETFDEAGFPQYVMSEVKAQGFAKPTAIQSQGWPMALSGRDVVGIAETGSGK
TLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGG
VPKGPQIRDLTRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRK
IVSQIRPDRQTCMWSATWPKDVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFE
KRDRMAKHLDRIMEENKSAKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWV
LNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAIT
LFTTDNAKQARDLVSILTESKQQIDPRLAEMARYGGGGGGGNRWGGRGRGRGGFTASNAA
PLGNNRRW
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggaggctacggttcttctcgagaccactatggcagtggtggtggcggg
cactctagaggtggtggctacggaggtgggggctatggaggcagcaatggccactcccat
ggccactccagcggcggtggttatggctcgtatggaggaggtgctggcggccacggcagt
ggttacggtggtgctgggggcgacagaatgtcaaatcttggtgccggcttgaagacgcaa
aattgggacctgtcgaccctgcccaaattcgaaaaatcgttctacaaagaacatcctagc
gttacacagcgatcctcccaggaggttgacgcgtttcgcaaagagcaggaaatgactgtg
caaggcaaaaatgtccctcgtccagtggaaactttcgacgaagctgggttcccccagtac
gttatgtcagaggttaaggcccaaggttttgcgaagcccacggctattcagtctcaaggc
tggcccatggccctctctggtcgtgatgtagttggtattgccgaaactggatccggaaag
actttgacgtactgtttgcctgctatagttcacattaacgcccagcctctcctcgcccca
ggagatggccccatcgtccttgttcttgcgcctactcgtgagttggcagttcagatacaa
actgagattaccaaatttgggaaatcatctcgtattcggaatacttgcgtttacggtggt
gtccccaagggacctcaaattcgtgacctaactcgtggtgtcgaagtttgtatcgccact
ccaggtcgattgatcgacatgttggaggcgggaagaactaacctacgacgtgttacttac
cttgtcctcgatgaggcagatcgtatgcttgacatgggtttcgaaccccagatccgcaag
attgtttcacagattcgtcctgaccgacaaacttgcatgtggtctgctacttggcccaaa
gatgtccggcaacttgcccaggacttcctccacgactatattcaggtcaatattggctct
atggatttgtccgctaaccacagaatcactcaaatcgtggaaattgtttcggaattcgag
aaacgtgaccgaatggcgaagcatcttgaccgtattatggaggagaataaaagtgccaaa
gtcctcattttcactggaaccaaacgcgttgctgacgacatcactcgattcctccggcag
gatggatggcctgcgctttctatccacggtgacaaacaacaaaatgaacgcgattgggtc
ttgaacgaattcaagactggaaaaagtcccatcatggttgccaccgatgtggcttcccgt
ggtattgatgttcgcgatattactcatgtgttgaactatgactatccgaacaactcggaa
gattatgttcacagaatcggccggacaggtcgtgccggtgccaagggaactgcaattacc
ttgttcaccactgacaatgctaagcaggctcgtgatctggtttctatcctcactgagtcc
aaacagcagatcgatcctcgccttgccgaaatggcccgctacggcggtggcggtggtggt
ggcaatcgatggggtggtcgtggccgcggccgtggcggcttcaccgcttccaatgctgca
cccttgggcaacaatcgccgctggtaa
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