Blastomyces gilchristii: BDBG_09327
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Entry
BDBG_09327 CDS
T06540
Name
(RefSeq) nucleoporin
KO
K14308
nuclear pore complex protein Nup54
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BDBG_09327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_09327
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
BDBG_09327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_57_C
Motif
Other DBs
NCBI-GeneID:
8501009
NCBI-ProteinID:
XP_002620303
UniProt:
A0A179V6H1
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSLFGQQTSQQPQSTTGLFGSSSQPQQTGSLFGAQQANQQKPQGNLFGSLGQPQQQPQQQ
TGSLFGASTQQQQQQQTGGLFGSTQQQNQQKPGGLFSGLGSSTQTQPQQGGNLFAGLGST
SATQQPPQTGSLFGTSTTQQQQPQQQQQGGGMFSAFGQSAQQQQQPQAQQGGGLFAGLGA
NTQPQQPFGATLGAGQQQQQPQLGQSQQTAPTLWTPGQGMTGVHRTVPMQMSIVTDKWQP
TSRNSPFRAHLYNNVGEDNAPFFQPGPNDDEAKWEDALRKRPGPAYVPVLVQGFWELGKR
AQRQRDFLAMMQSRLHEINNALTELLSRHDLKISVKLAACRRRHVVLSQRCLALAAKTQI
LRNRGYAMDETEEELQKKLSQLERSVFDPSLNGRTEEIWARMLAIREQSKRLQLEVERTG
QEANQQADDELDETALKTAKKILDNYASQIQHLNKELAAAQKDFETIHGSST
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctttggacagcaaacatctcaacagccccagtccaccacggggctgtttggg
tcaagcagccagccccaacagacgggaagtttattcggagcgcaacaagcaaaccagcag
aaacctcagggaaacctttttggctctctcggccaaccgcagcagcaaccgcagcagcag
actggtagcctctttggcgcaagcacccagcagcagcagcagcaacaaacaggggggttg
tttggcagtacccagcaacaaaaccaacagaaaccaggcgggttattctccggacttggc
tctagtactcaaacgcagccgcaacaaggaggtaatttgttcgccggacttgggtctact
tctgctacgcaacaacctccgcaaaccggcagccttttcgggacttcgactacccaacaa
cagcagcctcagcagcagcaacaaggcggtggtatgttttcggcattcggtcagagcgcc
cagcagcaacagcagcctcaggcacagcagggcggcggactctttgctggcctgggagca
aatactcaaccgcaacaaccgtttggggctacactcggcgctggacagcaacaacaacag
ccacagctcgggcaatctcaacaaacagcgccgacgttatggacgccggggcaagggatg
actggtgttcaccgtacggtaccaatgcaaatgagcatcgttaccgataagtggcagccc
actagtcgaaactccccgtttcgcgctcacctatacaacaatgtaggcgaagacaatgcg
ccctttttccaacctggtccgaatgacgatgaagcaaaatgggaggatgcactgcggaaa
agaccaggtccggcttacgtccctgtgctcgtacaaggattttgggagcttggaaaacgg
gcgcagcgacaaagggatttccttgcgatgatgcaatcccgcctacatgagattaataac
gctctcaccgaactcctctcgcgacacgacttgaaaatttcggttaagctcgcagcctgc
agacgaaggcatgtcgtcctcagtcagagatgtcttgcccttgcggcaaaaacacaaata
ctgaggaatcgtgggtatgccatggatgagaccgaggaggagttgcaaaagaagcttagc
caactagaacgctccgtttttgacccctccctaaatggccgcacggaggagatctgggcc
agaatgctggcaatccgggaacaatcgaagcgcctgcaactggaagtggaaagaactgga
caagaagctaaccaacaagccgatgatgaattagatgagactgctctaaaaactgccaag
aagattctggacaactacgcgtcacaaatccagcatctaaataaggaacttgctgctgcg
cagaaggattttgaaacaatacatggatcctcaacatga
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integrated database retrieval system