Alkalicoccobacillus gibsonii: BGM20_02910
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Entry
BGM20_02910 CDS
T04820
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BGM20_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgi03400
]
BGM20_02910
DNA repair and recombination proteins [BR:
bgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BGM20_02910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
Rad17
AAA_29
G-alpha
SAPIS-gp6
nSTAND3
nSTAND_NTPase5
KH_1
Motif
Other DBs
NCBI-ProteinID:
AOL29642
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Position
540108..542684
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AA seq
858 aa
AA seq
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MAGYTPMIQQYLKIKAEHQDAFLFFRLGDFYEMFFEDAKKASQELEITLTSRDGGAAEKI
PMCGVPYHSASAYIEQLIKKGYKVAICEQTEDPKAAKGVVKREVVQLITPGTVMDGKGIH
ESENNFIASVSACSNGYGLALSDLTTGENLAVLIERLEDVISEIYSVGAREIVVSGSLDA
DTVAQLRERCGATISIEDGETDEHVTIIEHLNNEDITKTFLRLYTYLKRTQKRSLDHLQP
VQVYELEEAMKIDLYSKRNLELTETIRSKNKKGSLLWLLDETKTAMGGRLLKQWIDRPLI
RVNQIEERQEMVETLMSHFFEREDLRERLKEVYDLERLAGRVAFGNVNARDLIQLKESLK
QVPGIKQLVASLAHDKAKERAERIDPCGDVLELLEEALYENPPLSVKEGNLIKDGYNQKL
DEYRDASRNGKDWIARLEQQEREYTGIRSLKVGFNKVFGYYIEVTKANLHLLEEGRYERK
QTLTNAERYITPELKEKEALILEAENNICELEYELFTELREKVKQYIPRLQLLAKQMSEL
DALQCFATISENRHYTKPEFSKDEVEVIEGRHPVVEKVMDSQEYVPNNCMMGDNRQMLLI
TGPNMSGKSTYMRQIALISIMAQIGCFVPAKKAVLPIFDQIFTRIGAADDLISGQSTFMV
EMLEAKNAIVNATKNSLILFDEIGRGTSTYDGMALAQAIIEYVHDHIGAKTLFSTHYHEL
TVLEDKLPQLKNVHVRAEEYNGTVVFLHQIKEGAADKSYGIHVAQLAELPGDLIARAQDI
LKELEHSGNKPEVPVQKPQVKEEPAQLSFFDEAEKPAETPKLSKKEKQVIDAFKSLNILD
MTPLEAMNEMYKLQKKLH
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggccggttatacgcctatgatacagcaatatttaaaaataaaggcagagcaccaggat
gcctttttattttttcgcctgggtgatttttacgaaatgttttttgaggacgccaaaaaa
gcgtcacaagagctggaaattacgttaacgagcagagatggcggtgcggctgaaaaaata
ccgatgtgcggtgtgccgtatcattctgcttccgcgtatatcgaacagcttattaaaaaa
ggatacaaagtggcgatctgtgaacagacggaagatccgaaagccgcaaagggcgttgtg
aaaagagaagtggttcagctgattacgcccggaactgtaatggacggcaaaggcatccat
gaatcggaaaataactttatcgcatctgtttcagcctgctcgaacggatacggacttgcg
ctgtctgatttaacaacgggagaaaatttggctgttttgattgaacggcttgaagacgtc
atatcagaaatttattcagtcggcgcacgggaaatcgtggtttcaggaagcttggatgcc
gatacagtggcacagctgagagagcggtgcggtgcaacaatttcaattgaagacggagaa
acagacgaacacgtaacgatcattgagcacttaaataatgaagatataacaaaaacattt
ctgcgcttatatacgtatttgaaaagaacccaaaagcgcagccttgatcatcttcagccc
gtgcaggtgtatgagcttgaggaagcgatgaaaattgacttgtactcaaagcgtaatctg
gagctgaccgaaacgattcgttcgaaaaataaaaaaggctcccttttgtggctgctggat
gaaacaaaaacggcaatgggaggccggctgcttaaacagtggattgaccggccgcttatc
agagtcaatcaaatcgaagagcgccaagaaatggtggaaacattaatgtcccatttcttt
gaacgggaagatctgcgtgaacgtttaaaagaagtatatgacttagaacgccttgccggc
cgcgttgcattcggaaatgtcaatgcccgggatttgattcagctgaaggaatcgttaaag
caagttcctggcatcaaacagctggttgcttcactggctcatgacaaggccaaggaacgt
gcagagcgcattgacccttgcggggatgtacttgaactgctggaagaagcgctgtacgaa
aaccctcctttatcggtaaaagaagggaatctgattaaagatggttataatcaaaagctt
gatgaatatcgtgatgcaagcagaaacggaaaagactggattgcccgcctggaacagcag
gagcgggaatacacaggcattcgttctttaaaggttggctttaataaagttttcggttat
tacattgaagtgacaaaagcaaatttgcatttgcttgaggaagggcgttatgagcggaaa
cagacgttaaccaatgcagagcgctacattacacctgaattaaaagaaaaagaagcgctc
attttagaggcggaaaataacatctgtgagctggagtacgagctgtttaccgagctgcgc
gagaaagtgaagcagtatattccgcggctacagttgcttgcaaaacagatgagcgagctg
gacgcactgcaatgctttgcgacaatcagtgaaaatcgccactacacgaaaccggagttc
tctaaagatgaagtcgaagtgattgaaggcagacacccggttgttgaaaaagtcatggac
agccaggaatatgtcccgaacaactgtatgatgggcgataacagacaaatgcttctcatt
acaggtccaaacatgtcagggaaaagcacgtatatgagacaaatcgcgctcatttccatt
atggcgcaaatcggctgctttgtacccgcgaaaaaagcggtgcttccgatttttgatcaa
attttcacacgaatcggcgctgcagatgatttgatttccggacaaagtacatttatggta
gaaatgcttgaagcgaaaaatgcgattgtcaacgcgacgaaaaacagcctcattctgttt
gatgaaatcgggcggggaacgtccacttatgacggcatggcgctggcacaggcgattatt
gaatatgttcacgatcatatcggcgccaagacgctgttcagcacacactatcacgagctg
accgttcttgaggacaagctgccccagctgaaaaacgttcatgttcgcgctgaagaatat
aacggaacggttgtctttcttcatcaaatcaaagaaggtgccgctgataaaagctatggt
atccatgtagctcagcttgccgaactgccgggagatctgattgcccgcgcccaagatatt
ttaaaagagcttgaacattcaggaaacaaaccggaagtgccggtgcagaaacctcaggtg
aaagaagagccggcacagctgtccttttttgacgaagcggaaaagccggctgaaacacca
aagctttcaaaaaaagaaaagcaagtgatcgatgctttcaaatcacttaatatacttgat
atgacaccgcttgaagcgatgaatgaaatgtacaagctgcaaaagaaattacattaa
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