Alkalicoccobacillus gibsonii: BGM20_05880
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Entry
BGM20_05880 CDS
T04820
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgi03400
]
BGM20_05880
DNA repair and recombination proteins [BR:
bgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BGM20_05880
TLS (translesion DNA synthesis) factors
Other SOS response factors
BGM20_05880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
AAA_21
AAA_15
TorS_sensor_domain
HOOK
DUF1664
AAA_22
PUMA_CC
FlpD
RsgA_GTPase
Nup54_57_C
ABC_tran
MutS_V
LEKR1
Motif
Other DBs
NCBI-ProteinID:
AOL30180
LinkDB
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Position
complement(1163927..1165657)
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AA seq
576 aa
AA seq
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MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEA
KAELEGLFLLESGHPVLGVCAEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLRE
IGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALKTYQEGYQRYMKLLKKLKQLS
ESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQISNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLKKMSESVSNSYYLLEDATFQMRNMLDELEFDPERLN
YIEMRLNEIKQLKRKYGATVEDILEYASKIEEEIDQIENRDSHLQSLKKELDSVGKDVAV
EAANVSQIRKTWAKKLADEIHRELKSLYMEKSTFDTEFKVRTASRNEEAPLVNGQPVQLT
EQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRVKPLSKQE
KVAEIGRMIAGVEVTDLTKRHAKELLKQADQVKTTG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
ttgttagctgaactatcgattaaaaactttgccattattgaggaactgacggtttctttt
gaacgcgggcttacggttttaacaggagaaaccggagccggcaaatccatcatcatagat
gccatttctcttttagtcggaggccgcggatcatctgaatttgttagatatggggaagca
aaagccgaacttgaagggctgtttctgttggagagcggccatcctgttttaggcgtatgc
gctgagcagggaatcgacgtttcagacgaaatgatcgtcatgagaagggatatcagcacg
agcgggaaaagcgtttgccgtgtcaatggcaagcttgtcacgattgcttcgctaagagag
atcggcaggcttttattagatattcacgggcagcacgataaccagctgttaatggaagac
gaaaatcatctccagcttttggacaagtttgccggggccgaagtggaaagcgcgctcaaa
acgtatcaggaagggtaccagcggtatatgaagctgctcaaaaagcttaagcagctttct
gaaagcgaacaggaaatggcccatcgtcttgatcttattcaatttcagctcgaagaaatc
gaatcggcaaagcttgagcttaacgaagatgaacagctccaagaagagcgccagcaaatt
tcaaactttgagaagatatatgagtcgctgcaaaatgcatataacgcgcttcgcagtgag
cagggcggattggactgggttggaatggcatcagcgcagcttgaagatatatctgatatt
aatgaaccgctgaaaaaaatgtctgaaagtgtttcgaactcctactatttgcttgaggat
gccacatttcagatgagaaatatgctggatgagcttgaatttgatccggaacgcctgaac
tatattgagatgcgacttaatgaaatcaaacagctgaaacgaaaatacggtgccactgtt
gaagacattttggaatatgcttctaaaattgaagaagagattgaccaaattgaaaacagg
gacagccaccttcaaagcttgaaaaaggagcttgactccgtcggcaaagatgtcgcagtg
gaagcggcaaatgtgtcacaaatccgaaaaacatgggcgaaaaagctggctgatgagatt
catcgggaattaaaaagcctgtacatggaaaaatcaacttttgatacggaatttaaggtc
agaacagcgtcacgcaatgaagaagctccgcttgtaaacggccagcccgttcagctgact
gaacaagggattgacctggtgaagtttttaatttcgaccaatacaggcgagccgctgaaa
tccctttcgaaagtcgcttcaggtggagagctgtcacgggtgatgctggccataaaaagc
attttttcctcacaacaggatgtgacatcgatcatttttgatgaggttgataccggtgta
agcggcagggtcgcacaggcaattgctgagaagatccataaggtgtcaataggatcacaa
gtgctgtgcattacacacctgcctcaggtggctgccatggccgatacgcatctttatatt
gcgaaggagttaaaagacggcagaacgacgacacgtgtcaagccgctctctaagcaggaa
aaggtagcggaaatcgggcgcatgattgcaggtgtcgaagtaaccgatttaacgaaacgc
catgcgaaagaacttttaaaacaagcggatcaagtcaaaacaactgggtaa
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