Alkalicoccobacillus gibsonii: BGM20_06065
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Entry
BGM20_06065 CDS
T04820
Name
(GenBank) transcriptional regulator
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgi03000
]
BGM20_06065
Transcription factors [BR:
bgi03000
]
Prokaryotic type
Helix-turn-helix
XRE family
BGM20_06065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
HTH_37
KorB
Sigma70_r4
HTH_10
GH-E
CdhC
Phage_CI_repr
DUF6364
Motif
Other DBs
NCBI-ProteinID:
AOL30215
LinkDB
All DBs
Position
1196019..1196360
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AA seq
113 aa
AA seq
DB search
MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSV
HTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgacattgattggccagcgtattaaacaataccgtaaagaaaaaggctactcactatca
gaactagctgaaaaagctggggtagcgaagtcttatttaagctcaatagaacgaaatcta
caaacgaacccctccattcaatttctcgaaaaagtctccgctgttctggacgtctcggtt
catactttgctcgatgagaaacatgaaaccgaatacgatggtcaattagatagtgaatgg
gagaaattggttcgcgatgcgatgacatccggggtatcgaaaaaacaatttcgtgaattt
ttagattatcaaaaatggagaaaatcccaaaaagaggagtag
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