Alkalicoccobacillus gibsonii: BGM20_06390
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Entry
BGM20_06390 CDS
T04820
Name
(GenBank) transcriptional repressor CcpN
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgi03000
]
BGM20_06390
Transcription factors [BR:
bgi03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
BGM20_06390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
MarR
HTH_24
HTH_Mga
HTH_PafC
CggR_N
GntR
TFIIE_alpha
HTH_AsnC-type
HrcA_DNA-bdg
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AOL32985
LinkDB
All DBs
Position
complement(1247309..1247947)
Genome browser
AA seq
212 aa
AA seq
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MSTIELNKRQEHILQIVKENGPITGEHIAEKLNLTRATLRPDLAILTMSGFLEARPRVGY
FYTGKTGTQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVL
VGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPV
IKDTDKGFEVIGRVTKTNMTKILVSLSENEIL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgatcgaactaaataaacggcaagaacatattttgcagattgtaaaagaaaac
gggccgattacaggggagcatattgcagaaaagctgaacctaaccagggcgacattgcgc
ccggatttagccatactcaccatgtcaggattcctcgaggcgcgcccgagagtcggttat
ttctatacgggaaaaaccggcacacagcttttggcggataaactcaaaaagcttcaggtg
aaagactttcaatctatccccgtagtgattcacgaaaacgtttctgtgtacgatgcgatt
tgcaccatgtttttagaagatgtaggtactctgtttgtggtggaccgcgatgctgtttta
gtcggggtgctttcacgaaaagacttgctcagagcgagcattggccagcaggagcttaca
tcggtccctgttcacatcattatgacaaggatgccgaacattacggtgtgcagacgcgag
gattatgtgatggacattgcaaagcacttaatagaaaaacaaattgatgcactgcctgtc
atcaaagacaccgataaaggctttgaagtgatcggcagagtgacaaaaacaaatatgacc
aaaatacttgtcagtttatctgaaaatgaaatcctataa
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