Alkalicoccobacillus gibsonii: BGM20_08230
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Entry
BGM20_08230 CDS
T04820
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BGM20_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgi03400
]
BGM20_08230
DNA repair and recombination proteins [BR:
bgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BGM20_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
FapA
Lebercilin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOL30622
LinkDB
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Position
complement(1577982..1580339)
Genome browser
AA seq
785 aa
AA seq
DB search
MQQKVLSALEFHKVKEQVIGHAASSLGKEMLLELKPSASIDEIKKQLDEVDEASDIIRLR
GQAPFGGLVDIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAEDGVDIPLIH
QHAEQLITLSDLERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRVRDRLESMLRSSS
ASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA
KVKEKQEIERILRVLTEKTAEYTEELFVDLQVLQTLDFIFAKARYAKAVKATKPIMNDTG
FIRLKKARHPLLPPDQVVANDIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLH
IPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAG
TDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYK
LLIGVPGRSNAFEISKRLGLPDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSET
ESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEE
HKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKAQKRDFKPGDEVKVLTFGQKGTLLEKT
GGNEWNVQIGILKMKVKEKDLEFIKSAPEPKKEKIITAVKGKDYHVSLELDLRGERYENA
LSRVEKYLDDAVLAGYPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVT
VVELK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaaaaagtattatcagctcttgaatttcataaagtgaaagaacaggttattggg
catgccgcttcatcgctcggaaaagaaatgcttctcgagcttaagccttctgcttctata
gacgaaatcaaaaaacagctggatgaagtagacgaagcttctgacattatccggctgaga
ggccaagcgccatttggcggccttgtagatatcagaggagcgttaagacgggcggaaatc
ggcagtgttctcagtccgtctgaattcactgaaatctcaggcctgctttatgcagttaaa
caaatgaaacattttatcacccaaatggctgaagacggtgtcgacattccgctgatccat
cagcatgctgaacagcttatcacgctgtccgatttagagcgggacattaattcctgcatt
gatgatcacggagaagtgcttgatcatgcatcggaaacattaagaggaatccgcacacag
ctcagaacactcgaatcaagagtcagagaccggttagagtcgatgctgcgttcctcttcc
gcatcgaaaatgctgtctgatacgattgttacgattcggaatgaccgctttgtgatcccg
gtcaaacaggagtacagatccagctatggaggaattgtgcacgacacctcatcctctggt
gcgacactattcattgaaccgcaggcgattgtagatatgaacaattcccttcagcaggcg
aaagtgaaagaaaagcaagaaattgaacggattttgcgtgtgctgacagagaaaacggca
gagtatacagaggagctatttgtagatttgcaagtgctgcagacgcttgactttattttt
gcaaaagctagatatgcaaaagcggttaaagcgacaaaaccgattatgaacgacaccggc
tttatccgtttgaaaaaagcccgccatccattgcttccgcctgatcaggttgttgccaat
gacatcgagcttggccgcgatttttcaaccattgtcatcacagggccaaacaccgggggg
aaaacagtcacccttaaaacgttaggcctgctaaccttaatggcgcagtcaggtcttcat
atcccggcagatgaagggtcagaagcggcagtatttgagcacgtattcgctgatatcggt
gatgaacagtcgattgagcaaagtttaagtacgttctcatcccatatggtgaatattgtc
ggcattttagaacaggtcaatgaaaatagccttgtgcttttcgatgaacttggtgcaggg
acagatccgcaggagggagcggccctcgccatgagcatcttggatgacgtgcatcgcacc
aatgcacgagtgttagctacgacgcattatccggaattgaaggcgtacggctataacaga
gaaggcgtcatgaatgccagcgttgaatttgacatcgaaacgctgtcaccgacctataaa
cttttaattggtgtgccgggtcgaagcaatgctttcgaaatttcaaaacgcctcgggctc
ccggaccatatcatcgggcaggcgaagtcagaaatgacggccgagcataacgaagtcgat
acgatgattgcgtcgctggaacaaagcaaaaaacgtgcggaagaagagctttctgagaca
gaatcaatcagaaaagaagcggaaaaactgcataaagagctgcagcagcaaatcatcgag
cttaacagcaaaaaagacaaaatgcttgaagaggcagaacagcaggctgctgaaaaagta
aaagcggcaatgaaagaagccgaggacattattcatgaattgcgctccataaaagaagaa
cacaaatccttcaaggatcacgagctgattaacgcgaagaaacggttagaaggcgctatg
cctgcttttgaaaagtccaagaaaccggagaagccgaaagcgcaaaaacgcgactttaag
cctggcgacgaggtgaaagtcctcactttcgggcaaaaaggaacattgctcgaaaaaaca
ggcggcaatgaatggaatgttcaaatcggtattttaaagatgaaagtaaaagaaaaagat
ctggagtttatcaaatcagctccggagccaaaaaaagaaaaaatcattacagcggtcaag
ggaaaggactatcacgtatcgcttgaacttgatctccgcggcgaacgctatgaaaatgcc
ctaagccgggttgaaaaatacttggatgatgcggtgttagccggatatccaagagtgtca
atcatccacggaaaaggaaccggcgctttaagaaaaggcgtacaggatcttctgaaaaac
catcgcagcgtcaaaagttcccgtttcggtgaagcaggtgagggaggatcaggcgttacg
gttgttgaactaaaataa
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