Alkalicoccobacillus gibsonii: BGM20_12350
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Entry
BGM20_12350 CDS
T04820
Name
(GenBank) DeoR family transcriptional regulator
KO
K22103
DeoR family transcriptional regulator, carbon catabolite repression regulator
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgi03000
]
BGM20_12350
Transcription factors [BR:
bgi03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
BGM20_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_23
HTH_20
MarR_2
Cpn10
MarR
AA_synth
Phage_rep_O
GntR
HTH_IclR
DUF977
DUF1670
TFIIE_alpha
HTH_Crp_2
Replic_Relax
DUF5697
HTH_17
FaeA
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AOL31367
LinkDB
All DBs
Position
complement(2404937..2405713)
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AA seq
258 aa
AA seq
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MYQEERLVAILDFLKQHNRITTEQICTLLQVSRDTARRDLVKLEEQNAIIRTRGGAILPT
VHQKIQSYSGRLKTVSEEKNKIGRLAASLIHDGDRVILDASTTVQACAKHLNAVDCTVIT
NSINLADVLSDKEGIEIYLLGGKLEKEHRFLYGSSVIEKLSSYHVDKALIGVVGISEHGI
TIAHEEDGMVKRKMIQQAKQVIALADHSKLGSTSFYQYAELNEIDLLITDRLPNQAFCDL
LDRNGVELLVTEQDEGKD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgtaccaagaagaaagattagtagcgattttggattttttaaaacagcataaccgaatt
acaacggagcagatctgtacgctcctgcaagtgtcaagggatacagcgcgacgagatctt
gtgaaacttgaggaacagaatgccatcatccgcacaagaggcggcgccattttaccgact
gtgcatcagaaaattcaaagctattccggccgcctgaaaacagtgtctgaggaaaaaaat
aagatcggcaggcttgcagcatcgcttattcatgatggagaccgggtgattttagacgcc
tctacaactgttcaggcatgtgcaaagcatttgaatgcggttgattgtacggtaatcacc
aattcgattaatcttgcggatgtgctgtccgataaagagggaattgaaatttatctgctg
ggaggcaagctggaaaaggagcaccgctttctgtacgggtcctctgtgattgaaaagctc
tcaagctaccatgttgataaagcgctgattggtgtggtcggtatttccgaacatggcatt
acaattgcgcatgaagaggatggcatggtgaagcggaaaatgatacagcaggcaaagcag
gtcatcgcgcttgcagatcattcgaagctgggcagcaccagtttttatcagtatgcggag
ctgaatgaaatcgaccttttgattacagacaggctgccgaatcaggcattttgtgacttg
cttgaccgaaacggcgttgagcttctcgtgacagagcaggatgaaggaaaggactga
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