Alkalicoccobacillus gibsonii: BGM20_12805
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Entry
BGM20_12805 CDS
T04820
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BGM20_12805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgi03021
]
BGM20_12805
03400 DNA repair and recombination proteins [BR:
bgi03400
]
BGM20_12805
Transcription machinery [BR:
bgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BGM20_12805
DNA repair and recombination proteins [BR:
bgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BGM20_12805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
BUD22
Motif
Other DBs
NCBI-ProteinID:
AOL31452
LinkDB
All DBs
Position
complement(2478272..2478793)
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AA seq
173 aa
AA seq
DB search
MGIKQYSQEELKEMALVEIAHELFEEHKKPVPFQELLNEIASLLGVKKEELGDRIAQFYT
DLNIDGRFLALSDQTWGLRSWYPYDQLDEETQPTVKAKKKKAKKAVEEDLDLDEFEEIDE
DDLDLDEVEEELDLEADDFDDEDLDEDDDDLEIEEDIVDEDDEDYDDEEEEIK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
ttgggtatcaaacaatattcacaggaagagctaaaggaaatggctttagttgaaatcgct
cacgaattatttgaagaacataaaaaaccagttccttttcaggagcttttaaatgaaatc
gcatctttgctcggcgtgaaaaaagaagagcttggagaccgcatcgctcaattttataca
gatttaaacattgacggccgcttcctggcgctttctgaccagacgtgggggcttcgcagc
tggtatccgtatgatcagcttgatgaagaaactcagccgacagtcaaggcgaaaaagaaa
aaagcgaagaaagcagtcgaagaagatcttgatcttgacgagtttgaagagatcgacgaa
gacgaccttgatttggatgaagttgaggaagaactcgatcttgaagccgacgattttgac
gatgaagatcttgacgaagacgacgacgatcttgagatcgaagaagatattgttgatgaa
gatgatgaagactatgatgatgaagaagaggaaattaaatag
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