Alkalicoccobacillus gibsonii: BGM20_14695
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Entry
BGM20_14695 CDS
T04820
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BGM20_14695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgi03400
]
BGM20_14695
Enzymes [BR:
bgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BGM20_14695
DNA repair and recombination proteins [BR:
bgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BGM20_14695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AOL31801
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All DBs
Position
complement(2855437..2856195)
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AA seq
252 aa
AA seq
DB search
MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQPEGYHVYWNYAVK
KGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVYVMTVYTPNSRRGLERIDYR
MQWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLE
AGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMG
SDHCPVELIINI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgatttcatggaatgtaaacggcctgcgggctgtgatgagaaaaatggatttc
ctctcttatttgaaagaagaggatgcagatattatatgtcttcaggaaacgaagatacag
gacggccaggttgatctccagcctgaaggctatcatgtgtactggaattatgcagtgaaa
aaaggatattccggcacagctgttttttctaagcaagaaccgctgcaggtcatctacggt
atcggagtagaagagcatgaccaagaaggcagagtgattacgctggaatttgaaaacgtg
tatgtgatgactgtttacacgcccaattccagaaggggattagagcggattgattaccgc
atgcaatgggaagaggctttattgtcttatattcttgaattggatcagaaaaaaccagtg
attttatgcggtgatttgaatgtagcccatcaggagattgatttgaaaaatccaaaggcg
aaccggaataacgctggattttcagatcaagaaagagaggcattcactcgtttcttagaa
gctggctttgttgattcttttcgtcatgtttatcctgatcttgaaggcgcttattcttgg
tggtcgtatcgtgctggtgcccgggacagaaatattggatggcgcattgattattttgtt
gtttctgaaagccttaaggaacagattgaagatgccagcatatcagcggatgtcatgggt
tccgaccattgtcctgttgaacttatcatcaatatatga
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