Alkalicoccobacillus gibsonii: BGM20_15670
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Entry
BGM20_15670 CDS
T04820
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BGM20_15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgi03021
]
BGM20_15670
03400 DNA repair and recombination proteins [BR:
bgi03400
]
BGM20_15670
Enzymes [BR:
bgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BGM20_15670
Transcription machinery [BR:
bgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BGM20_15670
DNA repair and recombination proteins [BR:
bgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BGM20_15670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
PASTA
Motif
Other DBs
NCBI-ProteinID:
AOL31962
LinkDB
All DBs
Position
3022097..3023041
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEIDVQGEGTVTAADITHDSDVEI
LNPDLHIATLGENASFRVRLTAQRGRGYTPADANKRDDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaaaccaaaaatcgaaacggttgaaatcagcgacgatgccaaattt
ggtaagtttgtcgtagagccacttgagcgtggatatggtacaactctgggtaactcctta
cgtcgtatcctcttatcctcactccctggtgccgctgtaacatcaatccagatagatggt
gtactgcacgaattctcgacaattgaaggcgttgtggaagatgttacaacgattatctta
cacattaaaaagcttgcattgaaaatctactctgatgaagagaagacgctagaaattgat
gtacagggtgaaggaactgtaacggcagctgatattacacacgatagtgatgtagagatc
ttaaatcctgatcttcatatcgcgactcttggtgagaatgcgagtttccgagttcgcctt
actgctcaaagaggacgtgggtatacgcctgctgacgcaaacaagagagacgatcagcca
atcggcgtgattccgatcgattctatctatacgccagtttctcgtgtatcttatcaggta
gagaacactcgtgtaggccaagttgcaaactatgataaacttacacttgatgtttggact
gatggaagcactggaccgaaagaagcaattgcgcttggttcaaagattttaactgaacac
cttaatatattcgttggtttaactgacgaagctcaacatgctgaaatcatggttgaaaaa
gaagaagatcaaaaagagaaagttcttgaaatgacaattgaagaattggatctttctgtt
cgttcttacaactgcttaaagcgtgcgggtattaacacggttcaagagcttgcgaacaag
acggaagaagatatgatgaaagttcgaaatctaggacgcaaatcacttgaagaagtgaaa
gcgaaactagaagaacttggactcggacttcgcaaagacgattga
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