Alkalicoccobacillus gibsonii: BGM20_15695
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Entry
BGM20_15695 CDS
T04820
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgi03016
]
BGM20_15695
Enzymes [BR:
bgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BGM20_15695
Transfer RNA biogenesis [BR:
bgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BGM20_15695
Prokaryotic type
BGM20_15695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOL31967
LinkDB
All DBs
Position
3026103..3026846
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AA seq
247 aa
AA seq
DB search
MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRIPVVSSGRTDSGVHAAG
QVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGFHARFSAVKKEYRYFVYTEKH
PDVFKRHYAYHFSYRLNVQDMREAAKHLIGTHDFTSFCAAKTEVQDKVRTIYELDWTETA
DGLQMRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYL
WNVYYDN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaaatgcacgatttcttatgacggacatttgtttaacggttatcaggttcag
ccgggcaaaagaacggttcaggatgaactggagaaggctttggctgtcctgcataagtca
aaagacagaattccggtcgtttcgtctggaagaacagacagcggggttcacgcagccgga
caggtgattcattttgacactccgctgtctatcccggctgaaagatggccatatgcctta
aatgcactgcttccggacgatatcgcagtcaaacaggcagaaattgcggatgatgggttc
catgcacgatttagcgcagtcaaaaaagaatatcgctactttgtatacacggagaaacac
ccggacgtatttaaacggcattacgcttaccatttttcatatcgccttaatgtgcaggac
atgagagaagcggcaaagcatcttatagggacacatgattttacgagcttttgcgcggct
aaaacagaagtgcaggacaaggtaagaacgatatacgaacttgattggactgagacggct
gacggcctgcaaatgcggatcacaggcagcggtttcttatataatatggtcagaattatt
gcgggtactttgcttgatgcaggtattggaaaaatttctcccgatgaggtgaaatccatg
ctggaagcgaaggatcgcgaagcggcagggcgcacagcgccggggcacgggctatattta
tggaacgtttactatgacaactaa
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