Alkalicoccobacillus gibsonii: BGM20_17465
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Entry
BGM20_17465 CDS
T04820
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgi03021
]
BGM20_17465
Transcription machinery [BR:
bgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BGM20_17465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
DUF1492
GerE
DUF134
Phage_rep_O
PhyR_sigma-like
HTH_23
HNF-1_N
IF2_N
NirdL-like_HTH
KORA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AOL32277
LinkDB
All DBs
Position
3394577..3395365
Genome browser
AA seq
262 aa
AA seq
DB search
MTQPSKTTKLTKDEVDRLISDYQTRQDEQAQETLVRVYTNLVDMLAKKYSKGKSFHEDLR
QVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPRIKM
AVDQLTTETQRSPKVEEIAEFLDVSEEEVLETMEMGKSYQALSVDHSIEADSDGSTVTIL
DIVGSQEDGYERVNQQLMLQSVLHVLSDREKQIIDLTYIQNKSQKETGDILGISQMHVSR
LQRKAVKKLREALIEDPSMELM
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccatcaaaaactacgaaactaactaaagatgaagtcgatcggctcataagc
gattaccaaacaaggcaagatgaacaggcgcaggaaacgcttgtgcgggtgtatacaaat
ctggttgacatgcttgcgaaaaaatattcaaaaggcaaaagcttccacgaggatctccgc
caggtcggcatgatcgggctgctaggcgcgattaagcgatacgatcctgttgtcggcaaa
tcgtttgaagcttttgcaattccgacaatcatcggtgaaattaaacgtttcctcagagat
aaaacatggagcgttcatgtgccgagacgaattaaagaactgggtccaagaatcaaaatg
gcggttgatcagctgaccactgaaacacaaagatcgccgaaagtcgaagagattgccgaa
ttcctcgatgtttctgaagaagaggttcttgaaacgatggaaatgggcaaaagctatcaa
gccttatccgttgaccacagcattgaagcggattcggacggaagcaccgtcacgattctt
gatatcgtcggatcacaggaggacggatatgagcgggtcaaccagcaattgatgctgcaa
agcgtgcttcatgtcctttcagatcgtgaaaaacaaatcatagaccttacgtatattcaa
aacaaaagccaaaaagaaactggggacattctcggtatatctcaaatgcacgtctcgcgc
ttgcaacgcaaagctgtgaagaagctcagagaggccttgattgaagatccctcgatggag
ttaatgtaa
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