Alkalicoccobacillus gibsonii: BGM20_18530
Help
Entry
BGM20_18530 CDS
T04820
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bgi03009
]
BGM20_18530
Enzymes [BR:
bgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BGM20_18530
Ribosome biogenesis [BR:
bgi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BGM20_18530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
MTS
Methyltransf_11
RrnaAD
N6_N4_Mtase
Methyltransf_23
Methyltransf_4
N6_Mtase
UPF0020
TPMT
Methyltransf_12
Ubie_methyltran
PCMT
Motif
Other DBs
NCBI-ProteinID:
AOL32462
LinkDB
All DBs
Position
3593921..3595303
Genome browser
AA seq
460 aa
AA seq
DB search
MKMKPPVEKNEYYDVTFEDLTHEGAGVAKIQGFPIFVPNALPEEKAQIKVTRVKKGFAFG
RLIELKEESPHRTDAPCPIYKQCGGCQLQHMTYEGQLLFKQKQVKDVLERIGKLDLSNVT
VHPTLGMEDPWNYRNKAQVPVGEREGGLVAGFYQQRSHDIIDMSGCLIQQSKNDEAVQAV
KDICANYGVKAYNEERHKGWLRHIMVRYGVVTGEMMIVFITKTNDFPHKAKIIEDITAQF
PHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLY
DKALEYAELKGEETVIDAYCGIGTISLFLAKQAKKVYGVEIVPEAIADAKRNAELNGITN
AEFAVGEAETVIPKWYEEGITADTLVVDPPRKGCDEALLRTIVEMKPKRVVYVSCNPGTL
ARDLRVLEDGGYQTLEVQPVDMFPHTNHVECVSQLILKDS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaacccccagtagaaaaaaatgaatactacgacgtgacatttgaggatttg
acccacgaaggagcgggcgtcgcaaagatccaaggcttcccgatcttcgtgccgaacgcc
ctgccggaggaaaaagcccaaatcaaagtgacacgcgtcaaaaaagggttcgccttcggc
cgtctgattgagctgaaggaagaaagcccgcatagaacggacgccccatgcccgatttac
aagcaatgcggaggctgtcagcttcagcacatgacctacgaaggacagctcctgtttaaa
cagaaacaagtcaaagacgtcttagaacgcatcggcaagctggacctttcaaacgtcacc
gtgcacccgactctcggcatggaagacccgtggaactacagaaacaaagcgcaggtgccg
gtaggagaacgggaaggcggactcgtcgcgggattctatcagcaaagaagccatgacatc
attgacatgagcggctgcctgatccagcaatccaaaaacgacgaagccgtccaagccgtc
aaagacatttgcgcaaactacggtgtcaaagcctacaatgaagaacgccacaaaggctgg
ctccgacacatcatggtcagatacggcgttgttacgggcgaaatgatgatcgtcttcatc
acaaaaacaaacgatttcccgcataaagcgaagatcatcgaagacatcacagctcaattc
ccgcacgtcaaatccatcgtgcaaaacatcaacccgaacaaaacaaacgtcatttttggc
aacgaaacaaacgtcatctggggcgaagaatacatctacgacctcatcggagacgtcaaa
ttcgccatttccgccagatcgttttatcaggtcaacccagagcagacaaaggtgctctac
gacaaagcgcttgagtacgcggagttgaaaggcgaagaaaccgtcattgacgcctactgc
ggcatcggaacgatttctctcttcctggcaaagcaggcgaaaaaagtgtacggtgtagag
attgtgccggaagcaattgcagatgcgaagcgaaatgctgaattaaacggcatcacaaac
gctgagtttgcggttggagaagcggaaaccgtgattccgaagtggtatgaagaaggcatt
acggccgatacgctagtcgtcgacccgccaagaaaaggctgcgacgaagccctcctgcgg
acgattgtggagatgaagccgaagcgggtggtgtatgtgtcctgtaatccggggacgctt
gcgagagatttgcgggtgcttgaggatggcgggtatcagacgctcgaagtgcagcctgtg
gatatgtttccgcatacgaatcatgtggagtgtgtctcacaattaattttaaaagatagt
tga
DBGET
integrated database retrieval system
