Alkalicoccobacillus gibsonii: BGM20_19095
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Entry
BGM20_19095 CDS
T04820
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K08693
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:
3.1.4.16
3.1.3.6
3.1.3.5
]
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi00230
Purine metabolism
bgi00240
Pyrimidine metabolism
bgi00760
Nicotinate and nicotinamide metabolism
bgi01100
Metabolic pathways
bgi01110
Biosynthesis of secondary metabolites
bgi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BGM20_19095 (cpdB)
00240 Pyrimidine metabolism
BGM20_19095 (cpdB)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BGM20_19095 (cpdB)
Enzymes [BR:
bgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
BGM20_19095 (cpdB)
3.1.3.6 3'-nucleotidase
BGM20_19095 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
BGM20_19095 (cpdB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
NadN_nucleosid_C
Motif
Other DBs
NCBI-ProteinID:
AOL32569
LinkDB
All DBs
Position
complement(3710329..3714576)
Genome browser
AA seq
1415 aa
AA seq
DB search
MATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEY
AVKYQKDDIISGAKTHPIISVMNALKYDAGTLGNHEFNYGLDFLDGTIKGADFPIVNANV
KTTSGENRYTPYVINEKTFIDENGNEQKVKVGYIGFVPPQIMTWDKKNLEGQVQVQDIVE
SANETIPKMKAEGADVIIALAHTGIEKQSQSTGAENAVFDLATKTKGIDAIISGHQHGLF
PSAEYAGVAQFDVEKGTINGIPVVMPSSWGKYLGVIDLKLEKADGSWKVADSKGSIESIA
GNVTSRNETVTNTIQQTHQNTLEYVRKPVGKTEADINSFFAQVKDDPSIQIVTDAQKWYA
EKEMKDTEYKNLPILSAGAPFKAGGRNGANYYTNIPAGDLAIKNVGDLYLYDNTVQIVKL
TGSEVKDWLEMSAGQFNQIDLAKGGDQALLNDNFRSYNFDVIDGVTYQVDVTKPAKYNEN
GKVINADSSRIINLSYEGKPISPSQEFLVVTNNYRASGGGGFPHLTSDKIVHGSAVENRQ
VLMDYIIEHKTVNPKADNNWSIAPVSGTNLTFESSLLAKPFADKADDVAYVGKSANEGYG
VYKLQFDDDSNPDPPKDGLWDLTVMHTNDTHAHLDDAARRMTKINEVRSETNHNILLDAG
DVFSGDLYFTKWNGLADLKMMNMMGYDAMTFGNHEFDKGPTVLSDFLSGNSATVDPANRY
HFEAPEFPIVSANVDMSNEPKLKSFVKKPQTFTAGEKKAAGIHPYILLDVDGEKVAVFGL
TTEDTATTSSPGKSIVFNDAFETAQNTVKAIQKEEKVNKIIALTHIGHNRDLELAKKVKG
IDLIIGGHTHTLVDKMEIVNNEEPTIVAQAKEYGQYLGRVDVAFDENGVVQTDKSNLSVM
PIDEHTEENPEAKQELDQFKSELEDVKIEKVGYTDVALDGQREHVRTKETNLGNFIADGM
LAKAKEAAGARIAITNGGGIRAGIDKGDITLGEVLNVMPFGNTLYVADLTGKQIKEALEQ
GLSNVENGGGAFPQVAGIEYTFTLNNEPGHRVLEVKIESPNGDKVAINTDDTYRVATNNF
VGAGGDGYSVFTEASHGEDLGYVDYEIFTEQLKKLGNKVSPKLEGRIKEVFLPTKQEDGS
WTLDEDKFAIYAKNANTPFVYYGTHEGSQEKPINLKMKKDQVKLLKERESDPSLTVFNYW
YSMKMPMANLKNADTAIGIKSTGELDVSLADVYDFTVKQKGKEIKSFKEPVQLSLRMFDI
EEAHNPAIYHVDRKKKAFTKTDNGSVDDDMVTGYTNHFSEYTILNSGSNNKPPAFPSDQP
TGGDDGNHGGGSDKPGGKQPTDGNGGNDTPPGTQPTNGSGGNGSGGSGTDSPAGGLLPDT
ATSMYSILLAGFLISALGTAMYLHQRRKQNRANQA
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
ttggctacgactgatattcatgccaacatgatggattacgattactacagcgacaaagaa
acggcggatttcggtctggcgagaacagcgcaattgatccaaaagcaccgcgagcaaaac
cctaacacccttcttgtggataacggcgacttgattcaagggaatccgctgggtgaatac
gcggtgaaatatcaaaaagacgatattatctccggcgcgaaaacccacccgattatcagc
gtcatgaatgcgctgaaatacgacgccggaacgcttggcaatcatgaattcaactacggg
ctcgactttctcgacggcacaatcaaaggagccgatttcccgattgtaaatgccaacgtc
aaaacaactagcggtgaaaaccgttatacgccgtatgtgattaatgaaaaaaccttcatt
gatgaaaacggtaatgagcaaaaagtaaaagtgggctacataggctttgtcccgccgcaa
atcatgacatgggacaaaaagaatctcgaggggcaggtgcaggtgcaggatatcgtagaa
tccgccaatgaaacgatcccgaaaatgaaggcggaaggcgcagatgtcattattgccctc
gcccacaccggcattgaaaagcagtcacaatcaacaggtgcagaaaacgccgtgtttgac
cttgccaccaaaacgaaaggcattgacgcgattatctcgggccatcagcacggactcttt
ccttccgccgagtatgcgggtgttgctcagttcgatgtggaaaagggaacaattaacggc
attcctgtcgtcatgccaagcagctggggcaaatatttaggcgtgattgacctcaagctt
gaaaaggcggacggctcatggaaggtagcagattccaaaggaagtattgaatccattgcc
ggcaacgtcacatcaagaaacgaaaccgttacaaacaccattcagcaaacacaccaaaac
acactggagtatgttcgaaagccagtcggcaaaaccgaagcagatattaacagcttcttt
gcacaggtcaaagatgatccttccattcagatcgtgactgacgcgcagaaatggtacgcc
gaaaaagaaatgaaggataccgagtacaagaacctgccgattttatccgctggagcgccg
tttaaagcaggcggcagaaacggagccaattactatacaaacattccagccggagatctt
gcgattaaaaatgtcggtgacttgtacctttacgataatactgttcaaatcgtcaagctg
acaggcagcgaagtcaaggactggctggagatgtcagcaggccaattcaaccaaattgat
ttagctaaaggcggcgatcaggccttgctgaacgataatttccgctcctataattttgac
gtgattgacggtgtcacatatcaggtcgatgtgacaaaaccggctaaatacaatgagaac
ggaaaagtgatcaatgcggattcatcccggatcatcaatctttcctatgaaggcaagccg
atcagcccaagccaggaatttctcgtggtcaccaataactatcgggcgtccggaggcggc
gggttccctcatctgacgagcgataaaattgtccacggctctgcagttgaaaataggcag
gtgctgatggattacattattgaacataaaacagtcaatccaaaggcagacaacaactgg
tcaatcgcgcctgtttccggcacgaatctgacgtttgaatcctcgcttttggcgaagcca
tttgccgataaagcagacgatgtcgcttatgtaggcaagtctgcgaatgaaggctatggt
gtgtataagctgcaattcgatgatgattcaaatccagatcctcctaaagacggactgtgg
gatctgaccgtcatgcacaccaatgatacgcacgcccatctcgatgatgcagcgagacga
atgacgaaaatcaacgaagtacgcagcgaaacaaatcacaacattctccttgatgcggga
gatgtgttttccggcgatctgtattttacaaaatggaacggtttggccgatctgaaaatg
atgaacatgatgggctatgacgccatgaccttcgggaaccatgaatttgataaaggcccg
acagtgctttctgattttctaagcggaaacagcgcaaccgttgatccagcgaaccgctat
cactttgaagcgccggaatttccgattgtcagcgcaaacgtagatatgtcaaatgagccc
aagctgaaatcatttgtcaaaaagccgcaaacctttacggcaggtgaaaagaaagcggcc
ggcatccacccttacattctgttagacgttgacggggagaaagtcgccgtattcggcctg
acaacggaagatacagccaccacatcaagcccgggcaaaagcatcgtattcaatgatgcc
tttgaaacagcacaaaacaccgtcaaagcgattcagaaagaagaaaaggtaaataaaatt
attgctttaacccacatcgggcataaccgggatcttgagctagccaaaaaagtaaaaggc
attgacttgatcatcggcggacacactcacaccctcgttgacaaaatggagatcgtgaac
aacgaagaaccgacgatcgtggcgcaggcaaaagaatacggccaatacttagggcgcgtt
gatgtcgcatttgatgaaaacggcgttgtgcaaacagacaaatcaaatctgagcgtgatg
ccgattgatgaacatacagaagaaaacccagaagcaaaacaagagctcgatcagttcaaa
agcgaattagaggacgtgaaaattgaaaaagtcggctacacggatgtggcgcttgacggc
cagcgtgagcatgtgcgcacgaaagaaacgaatctcggaaacttcatcgcggacggtatg
ctggcaaaagcgaaagaagcagccggcgccagaatagcgataacaaatggcggcggcatc
agagcaggcattgacaaaggtgatatcacactcggcgaggtgctcaacgtgatgccgttc
ggcaatacgctttacgtggccgatttaaccggaaaacaaattaaagaagcccttgaacaa
ggcctaagcaatgtggaaaatggcggcggcgctttccctcaggtggccggaatcgaatat
acctttacattaaacaacgaacctggacaccgtgtgttagaagtgaaaattgaatcgcct
aacggagacaaagttgctataaatacggatgatacctaccgcgtggcaacaaataatttt
gtcggtgccggaggagacggatattctgtctttacagaagcctcccatggtgaagacctt
ggctacgttgattatgagattttcaccgaacagctgaaaaaactaggaaacaaggtctct
cctaagcttgaaggacggatcaaagaagtattcctgccgacaaagcaggaggacggcagc
tggacacttgatgaagacaaatttgcgatttacgctaaaaatgccaacacgccgtttgtc
tattatggaacacatgaaggatctcaagagaagcctatcaatcttaaaatgaaaaaagat
caggtcaaacttttgaaagaaagagaatcagatccttcattgactgtgttcaactactgg
tacagcatgaaaatgccaatggcgaaccttaaaaacgcagacactgcaatcggaatcaag
tcgacgggagaattggatgtgtcactggcagatgtatatgactttacagtgaagcaaaaa
ggaaaggaaataaaatcattcaaggagcccgttcagctttcgcttcgcatgtttgatatt
gaagaagcccataaccctgccatttaccacgtcgacaggaaaaagaaagctttcacaaag
acagataacggatcagttgacgatgatatggtgacaggatatacaaaccacttcagcgaa
tacacgatcttaaattccggttcgaacaacaaaccgccggcattcccgtccgaccaaccg
acaggcggtgatgacggcaatcatggcggaggctccgacaaaccaggcggaaaacagcca
actgacgggaacggaggaaatgatacgcctcctggcactcaaccgactaacggctctggt
ggaaacggttcgggcggatcaggaacagacagtccggctggcggcctgcttccggacaca
gccacatccatgtactcgatcctgttggccggatttctgatcagcgcactcggcaccgca
atgtacttacatcagaggagaaaacagaatagagcgaatcaggcataa
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