Alkalicoccobacillus gibsonii: BGM20_20555
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Entry
BGM20_20555 CDS
T04820
Name
(GenBank) NTD biosynthesis operon regulator NtdR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
bgi
Alkalicoccobacillus gibsonii
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgi03000
]
BGM20_20555
Transcription factors [BR:
bgi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BGM20_20555
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_36
HTH_38
HTH_23
HTH_7
Lipoprotein_7
HTH_17
HTH_3
HTH_29
HTH_Crp_2
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AOL32825
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Position
3982445..3983434
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AA seq
329 aa
AA seq
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MPTIDEIAKLCNVSKTTVSRVLNNHPYVSKEKRDMILKAINELDYTPNYLARNFRRNKTQ
TIALSVPSIDHPFFAQLIKGVSHEALFKNYKVIVFQTFYDKQTELELLELLKHKEVDGII
LGTLENEWDQISPFLKYGPILLCNEYHHSADITIIGYDEFEAAYMGVVHLIERGHDKIGF
CFDTPYSEAQCQRKEGYLKALQDYNLHHRSEWIFGEMFNIEDGFRVFHKIKDLKDRPSAI
FTGNDQVAAGIIKQAMKNGFKVPEDLAVIGFDNQLICQVVTPTITTIDIPVIELGQQAVL
KIIESISGNATLNRRIIKLPTKLIIREST
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaattgatgaaatagcaaaattatgcaatgtgtctaaaaccacagtgtcaaga
gtattgaataatcatccttatgtgtcgaaagaaaaaagagatatgatcttaaaggctatt
aacgaacttgactacactcccaattatttagctcggaattttaggagaaataagacacaa
acgatagctttatcggttccgagtatcgaccatccattttttgctcaattaataaaaggg
gtctctcatgaagcactgtttaagaattacaaggtaattgtatttcagaccttttatgac
aaacagacggagctagaattactagagttattgaagcataaagaagtggatggcattatt
cttgggactttagaaaatgaatgggatcagatatcccctttcttaaagtatggtcctatc
ttattatgtaatgaatatcatcactcagcggacatcacgataattgggtatgatgaattt
gaagccgcatacatgggggtagtacatttaattgaaagagggcatgataaaattgggttt
tgttttgatactccatatagcgaagctcaatgtcagaggaaagagggttacttgaaagct
ttacaagattacaatttacatcatagaagcgaatggatattcggcgaaatgtttaatatc
gaggatggctttcgtgtttttcataagataaaggatctaaaggacagaccctcagcaata
tttacaggaaatgatcaagtcgccgcagggattattaaacaggcgatgaaaaatggcttt
aaagttccagaagacttagctgtaattggttttgacaaccaattgatctgccaagtcgtt
actccgaccataacaacaattgatatccccgtaatagaattaggccaacaggctgtgttg
aaaatcatcgagtccatttcgggtaatgccactttaaacagaagaattattaaactgcca
acaaagcttattataagagaatcaacgtaa
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