Brenneria goodwinii: AWC36_00320
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Entry
AWC36_00320 CDS
T05061
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
bgj
Brenneria goodwinii
Pathway
bgj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWC36_00320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bgj03000
]
AWC36_00320
Transcription factors [BR:
bgj03000
]
Prokaryotic type
Helix-turn-helix
Other families
AWC36_00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
AAA
AAA_16
HTH_30
Parvo_NS1
HTH_1
bpMoxR
AAA_3
nSTAND3
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ATA26829
UniProt:
A0A250BKW6
LinkDB
All DBs
Position
67587..69176
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AA seq
529 aa
AA seq
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MIVAGIERNVLKPLSFTCLLGECRSELLPLLSEVSKVVSAEGSLSKTLKLVLELMKQHLQ
VTRAMISLYDASCDQIFIHESFGLSKEEAEKGVYYPGEGITGKVVEAKQPIIVPDIADDP
RFLNRTGSWDKNEDRHLSFICVPIIRGMKVMGTIGIERQYNNDQLLYLDLEVLRIIATTT
AQAVELHLLERAHKKVLRDQDSLLRRTLRETFKPANIIGNSRVMQSVYQLIEKVSHARTT
VLILGESGVGKERVASAIHYNSPCATGPFVKFNCSSLPEGIIESELFGHEKGAFTGATSR
RAGRFEEADGGTIFLDEIGELTPLAQAKLLRVLQERCFERVGSNETIKVNVRILAATHRN
LQEMVANGTFREDLFYRLNVFPITIPPLRDRGNDILILADHFNAHFAKELGIDVPTIATP
ALNLLLSYSWPGNVRELENTMERAVLLADEGFIHSYHLPINLQPVILGETVTGLEAQLAR
IEYDIIVESLARNQGNISRTAAQLGMTRRALSLRMEKYQLSYKAYRSGN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgcaggcattgagcggaatgttttaaaaccactgtcgtttacctgtctgctg
ggtgagtgccgttccgagttactgccgctgctttccgaagtcagtaaagtcgtcagcgca
gaagggtcgctatccaagaccttaaagctggtgcttgagttgatgaaacagcaccttcag
gtgacccgggcgatgatcagcctttatgacgccagctgcgatcagatctttatccatgaa
agtttcggcttgtctaaagaagaggccgaaaagggcgtctattaccccggcgaaggcatt
accgggaaagtggttgaagccaaacagccgattattgtgccggatatcgctgacgatccc
cgttttcttaaccgtaccggcagctgggataaaaacgaggatcgtcatctgtcgtttatc
tgcgttcccattatccgcggcatgaaagtcatgggaacgatcggtattgaacgtcaatat
aacaacgatcaactgctctatctggatctggaagtcctgcggattatcgccaccaccacc
gcacaggccgttgagctgcatctgttggaaagagcgcataaaaaggtgctcagagatcag
gattcgctgttaaggcgtacgctgcgggaaaccttcaaacccgccaatatcatcggtaat
tcgcgggtgatgcaatccgtttatcaactgatagagaaagtcagccacgcccgcaccacc
gtattgattctgggcgagagcggcgtcggcaaggagcgcgtcgccagtgcgattcactat
aatagcccttgcgctaccgggccttttgttaaatttaactgctcctcgctgccggagggc
atcattgaaagcgaactgttcgggcatgaaaaaggcgcttttaccggcgcgacgtcacgg
cgggccgggcgctttgaagaggcggacggcggcaccatttttctggatgaaatcggcgag
ctgacgccgctggcgcaggcaaagctgttgcgcgtattgcaggagcgctgttttgaacgc
gtgggcagcaatgaaaccatcaaggtgaacgtgcgtattctggcggccacgcaccgcaat
ttgcaggagatggtcgccaacggcacgttccgcgaggatctgttttatcgcctgaatgtt
ttcccgatcaccattcctccgttgcgcgatcgcgggaatgatattcttattctggccgat
catttcaatgcccatttcgccaaagagctggggattgacgttccgaccatcgccacgccc
gccttgaatctgctgttgagctatagctggccgggcaacgtgcgtgaactggagaacacc
atggagcgggccgtgctgctggcggatgaaggcttcattcacagctaccatctgccgatt
aatctgcaaccggtgatcctgggggaaaccgtcaccggcctggaagcgcagttggcgaga
atcgagtacgacatcatcgtcgaatcactggcgcgcaatcagggaaatatttcccgcacg
gcggcgcaactgggtatgacccgacgggcgttgagcctgcggatggaaaaatatcagttg
agctataaagcgtaccggagcggaaattag
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