Brenneria goodwinii: AWC36_01695
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Entry
AWC36_01695 CDS
T05061
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bgj
Brenneria goodwinii
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgj03019
]
AWC36_01695
Enzymes [BR:
bgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AWC36_01695
Messenger RNA biogenesis [BR:
bgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AWC36_01695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
Helicase_C
DEAD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ATA22920
UniProt:
A0AAE8JMU9
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All DBs
Position
359615..362059
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AA seq
814 aa
AA seq
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MILPPVSAVLGDVITALHMSSQVLLNAPTGAGKSTWLPLQLLRQGKLDGKIIMLEPRRLA
VKSVAWRLAQQLGEEPGQTIGYRMRLESRVGAATRLEVVTEGILTRMLQQDAELKGVALV
VLDEFHERSLQADLALALLLDVQHGLRDDLKLLIMSATLDNSRLATRLPDATTVVSEGRS
YPVERDYYPLNSQERLEEGVARQVMRLLAEQPGSLLLFLPGVAEIKRVNALLADSVAGDV
DLCPLYGALTLAEQQKAILPSDKGRRKVVLATNIAETSLTIEGIRLVVDSGLERTTRFDV
KSGLTRLVTQRISQASMVQRAGRAGRLSAGVCWHLCSREQAERAAAQSDAEILNSDLGSF
WLDLLQWGCTDADQLIWLDPPPMPALRAARQLLHQLRITDARGMLTSEGRKIAALGCDPR
LAAMLTAAARQSNDALATAGCLAAILEEPPRGGSINLLDWLHRPLAHWLRRSRQLTRRLS
PESGRIDEGWAVWLLAQGFADRIARRRSQDGRYQLANGAGAMMPADEALSGADWLLVPAL
LQNSHNADARILLALPLDIARLEQQLPDLISEHNVVHWDEEKGTLRASKRSQIGCLTLRS
RPLSKPSDEELQLAMLAWLREQGLAALNWSPAAQQLRVRLRCARQWLPEVNWPPVDEETL
LATLEQWLQPSLSGVRDLRALRQIDLVEALMRLLDWPLRQRLDRALPSHYTVPGGSRLAI
TYYEDKPPVLAVRMQEMFGERQSPMLAEGRVALVLELLSPAQRPLQITQDLAAFWQGAYR
EVQKEMKGRYPKHVWPDDPANTVPTRRTKKYQNH
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
gtgattttaccgcccgtcagtgccgtcctgggtgatgtgataaccgcgttgcacatgtcg
tctcaggttttgttgaatgcgccgaccggtgcggggaaatcaacctggctgccgttgcaa
ctgctccgtcaggggaaactggacggaaagattatcatgctggaacctcgccggctggcg
gtaaaaagcgtggcctggcgtctggcgcagcagttaggagaagaaccagggcagacgatt
ggctatcggatgcgcctggaaagccgcgtcggcgcggcaacccgtctggaggtcgtcacc
gaaggtattttgacgcgcatgctgcaacaggatgccgaactgaagggcgtcgcgctggtt
gtgctggatgagtttcacgaacgcagtctacaggccgatctggcgctggcgctgttgctg
gacgttcagcacgggctgcgcgacgatttaaagctcctgattatgtccgccacgctggat
aacagccggcttgccacgcggcttcccgatgcgacgacggtggtatcggaagggcgcagt
tacccggttgaacgtgactattatcctttgaatagtcaggaacggctggaagagggcgtc
gcccgtcaggtaatgcgtttattagccgagcagcccggatcgctgttgctgtttttgccc
ggcgtcgccgaaatcaagcgggtaaatgctttgctggcggacagcgtggcgggtgacgtg
gatctgtgccctttatatggcgcgctgacgctggcggaacaacagaaagctattctgccg
tcggataaggggcggcgtaaggtggtgctggcgaccaacattgccgaaaccagtttgact
atcgaagggatccggctcgtggtggatagcggtctggagcggaccacgcgctttgacgtc
aaaagcggtttaacccggctggttacgcagcgcatcagtcaggcgtcaatggtgcagcgt
gccggacgcgccggccgattgagcgccggcgtctgctggcatttatgttctcgtgaacag
gcggaacgcgccgcggcgcaaagcgatgctgaaatacttaacagcgatctcggcagtttt
tggctggatctgttgcagtggggctgtacggacgccgatcagttaatctggctggatccg
ccgccgatgcccgcgctgcgggcggcccgtcaactcttgcatcaattacgcattaccgac
gcgcggggcatgttgacgtccgaggggcggaaaatcgccgcattaggctgcgatccgcgg
ctggcggccatgctgacggccgcggcacggcagagtaacgatgcgttggccacggcgggg
tgtctggcggcgatattggaagagccgcctcgcggcggatcgataaatctgctggattgg
ctgcatcgcccgctggcgcactggctgcggcggtcacggcagcttactcgccgtttgtca
ccggaatcaggccgtattgatgaaggatgggctgtctggctgcttgctcaggggtttgcc
gatcgtatcgcccgacggcgcagtcaggatggccgctaccagttggcaaacggcgccgga
gcgatgatgccggcggatgaagcgctgtccggcgccgattggttattggttcccgcttta
ttgcagaacagtcataatgccgatgcgcgaattttactggcgttgccgctggatattgcg
cgtttggaacagcagttgcccgacttgattagcgaacataacgtggtgcactgggacgaa
gaaaaaggtactctgcgcgccagcaaacgtagccagatcggatgcctgacgttacgttcc
cgtccgttaagcaaaccctccgatgaggagttacagctggcgatgttggcctggctgcgg
gaacaaggacttgctgcgctgaattggagcccggcggcgcaacaactgcgcgttcggctg
cggtgcgcccgccagtggctgcccgaggtaaactggccgccggtggatgaagaaaccctg
ctggcgacgctggagcagtggttacagccgtctttgtccggcgtgagggatttgcgtgcg
ttgcgccagatcgatctggttgaggcgttaatgcgcttgctggattggcctttacgtcag
cggctggatagggcgttgcccagtcattacacggtgccgggcggcagtcgtctggcgata
acctattatgaggataagccgccagtgctggcggtgcggatgcaggaaatgtttggcgaa
cgtcaaagcccgatgttggcggaagggcgcgtcgccttggtgctggagctgttgtcgccg
gctcagcggcctttgcagattacgcaagacctggctgctttttggcagggcgcttaccgt
gaggtacaaaaagagatgaaagggcgttatcccaaacatgtctggccggacgatccggcg
aatacggttccgacacggcgcaccaagaaatatcagaatcattaa
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