Brenneria goodwinii: AWC36_04460
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Entry
AWC36_04460 CDS
T05061
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bgj
Brenneria goodwinii
Pathway
bgj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWC36_04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgj03400
]
AWC36_04460
DNA repair and recombination proteins [BR:
bgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWC36_04460
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWC36_04460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
DUF87
HEM4
Motif
Other DBs
NCBI-ProteinID:
ATA23417
UniProt:
A0AAE8JLL3
LinkDB
All DBs
Position
1017809..1019818
Genome browser
AA seq
669 aa
AA seq
DB search
MSKVFKLNSEFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKGFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIMHTVPR
YTIYPKTHYVTPRERILQAMEDIKIELADRRKVLLANDKLVEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGDVIDQVVRPTGLLD
PVLEVRPVATQVDDLLSEIRLRAAVNERVLVTTLTKRMAEDLTEYLEEHGARVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITPSMERAISETERRREKQQAYNLEHGIVPQGLNKKIADILQLG
QPTHKGKGRGKKAAESDAGYQLMTPKALEQKIRELESKMMMHAQNLEFEEAAELRDRVQA
LRAQFIAAS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtattcaaactgaattccgaatttaaaccggcgggcgatcagccggaagcc
attcgtcgtttaaaggaaggattagaggatggattggcgcatcagacgctgctgggcgtt
accggatcgggtaaaacctttaccatcgccaacgtgattgccgatctgaatcgccccacc
atggtgctggcgcccaataaaacgctggccgcccagctttacggcgaaatgaaagggttt
ttcccggataacgcggtggaatacttcgtctcttattatgactactatcagcccgaagcc
tatgtgccgagttccgataccttcatagagaaggatgcgtcggttaacgaacatattgaa
cagatgcggctctcggcgaccaaagccatgctggaacggcgtgatgtggtggtggtcgcc
tcggtttccgccatttatggtttgggcgatcccgatctgtatctgaagatgatgctgcat
ctgacgcagggaatgcttatcgaccagcgtgcgattttgcggcggctggcggaactgcaa
tatacccgcaacgatcaggcgtttcagcgcgggactttccgcgtacgcggcgaagtgatt
gatattttccccgccgagtctgacgacatcgcgctgcgtgtcgagctgtttgatgaagag
gtggaacgcctgtcgctgttcgatccgttgaccgggcaaattatgcataccgtgccgcgc
tataccatctatcctaaaacgcactatgtgacgccgcgcgaacgtattttgcaggcgatg
gaggatatcaagattgaactggccgaccgccgcaaggtgctgctggcgaacgataagctg
gtggaagagcagcgactgagccagcggacgcagtttgatctggaaatgatgaacgagctt
ggttattgctcgggcatcgaaaactattcccgctatctgtccgggcgcggtcccggcgag
ccgccgccgaccctgtttgactatctgccggccgacgggttgttggtggtcgacgaatcg
cacgtcaccattccgcagattggcggtatgtaccgcggcgaccgggcgcgcaaagaaacg
ctggtggagtacggcttccgcctgccgtcagcgctggataaccggccgatgaagtttgaa
gagttcgaggcgctggcgccgcagaccatttatgtgtcggcgacgccgggcaactatgaa
ctggagaaatccggcggtgacgtgatcgatcaggtcgttcgacccaccggcctgctggat
ccggtcctggaagtcaggccggtggccacccaggtggacgatctgctgtcggagatccgt
ttgcgcgccgccgtgaatgaacgggtgctggtgacgacgctgaccaaacgcatggcggag
gatttgacggagtatctggaagagcacggcgcgcgggtacgctacctgcactctgatatc
gacacggtggagcgtgttgagattatccgcgatctgcggcttggcgaattcgatgtgctg
gtgggcatcaacctgctgcgcgaaggtctggatatgccggaagtctcgctggtggcgatt
ctggacgccgataaagaaggttttctgcgttccgaacgttcgctgattcagaccatcggg
cgtgcggcgcgtaacctgaatggtaaagccattctgtacggcgacagaattacgccgtcc
atggaacgggcgattagcgaaacggaacgccgccgtgagaaacagcaggcatacaacctt
gagcacggcattgtgccgcaggggttgaataagaaaatcgccgatattctgcaattgggc
cagccgacccacaaaggcaaaggccggggcaagaaagccgccgaatccgacgcgggctat
cagttaatgacgccgaaagcgctggaacagaagattcgcgaactggaaagcaaaatgatg
atgcacgcgcagaatctggagtttgaagaagccgccgaattgcgcgatcgggtacaggcc
ttacgggcgcaatttatcgccgcgtcctga
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