Brenneria goodwinii: AWC36_04620
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Entry
AWC36_04620 CDS
T05061
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgj
Brenneria goodwinii
Pathway
bgj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWC36_04620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgj03019
]
AWC36_04620
Enzymes [BR:
bgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWC36_04620
Messenger RNA biogenesis [BR:
bgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWC36_04620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
AAA_22
HEM4
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ATA23446
UniProt:
A0A0G4JYS0
LinkDB
All DBs
Position
1050811..1052184
Genome browser
AA seq
457 aa
AA seq
DB search
MSFDSLGLSADILRAVEEQGYREPTPVQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QLLSSAPPAKGRRPVRALILTPTRELAAQIGENVQAYSKYLRLRSLVVFGGVSINPQMMK
LRGGVDILVATPGRLLDLEHQNAVDLSQIEILVLDEADRMLDMGFIHDIRRVLAKLPAKR
QNLLFSATFSDEIKTLANKLLSNPASVEVARRNTASELVTQHVHFVDKRRKRELLSQLIG
ENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGSIRVLVA
TDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRDIE
RLLKREIPRIAIPGYEPDPSIKAEPIINGRQGNRGGGSRSAAPRGQSGAPRAQGERKSND
GARQTRRPGGNSAAPWGNSEGQRRSPRPQNRSKPAAK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagcgccgacattctgcgtgctgttgaagaacagggc
tatcgtgagcctacgcccgtacagcgccaggcgattcctgttgtgctggccggtcgcgat
cttatggccagcgcgcaaaccggtaccggcaaaacggccggttttactctgccgttgctg
caattgctgagcagcgcgccgccggcgaaaggccgtcgtccggttcgggcgttgatcctg
acgccaacccgcgagttggcggcgcagattggtgaaaacgttcaggcctacagcaaatat
ctgcgcttacgctcgctggtggtgttcggcggcgtcagcatcaatccgcagatgatgaag
ctgcgcggcggcgtcgatattctggtcgccacgccgggccggttgctcgatctggagcat
cagaacgccgtcgacctgtcgcagattgaaattttggtgctggatgaagcggaccgtatg
ctggatatgggctttattcacgatattcgccgcgtgctggcgaagctgccggctaaacgg
cagaacctgctgttttccgccaccttctctgatgaaatcaaaacgctggccaacaagctg
ttgagcaacccggcctcggttgaagtggcgcgccgcaacacggcgtcggagctggtgacg
caacatgttcattttgtcgataagcgccgtaagcgggaactgctgtctcaactgattggc
gagaataactggcaacaggtgctggtgtttacccgcaccaaacatggcgccaatcacctg
gccgaactgctggaaaaagacggcattacggcggcggcgattcatggcaacaaaagtcag
ggcgcgcgtacccgggcgttggctaacttcaaagacggttccattcgcgtgctggtcgcc
accgatatcgcggctcgtggtctggacatcgaccaactgccgcacgtggtgaactatgag
ttgccgaatgtgccggaagactatgtgcatcgtatcggccgtaccggccgggcggagtcc
accggggaagcgctgtcgctggtctgtgtcgacgagcataaactgctgcgtgacattgaa
cgcctgcttaagcgtgaaatcccgcgtatcgccattccgggctatgagccggatccgtca
atcaaggcggaacccattattaatggccgtcagggtaatcgcggcggcggttcccgtagc
gccgcgccgcgcggtcagtccggcgcgccacgcgctcagggcgagcgtaagagtaacgac
ggcgcccgtcagacgcggcgtcccggcggcaacagcgccgctccgtggggcaatagcgaa
gggcagcgtcgatcgccgcgtccgcagaaccgcagcaaaccggcagctaaataa
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